Macrococcus bovicus: QSV55_05245
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Entry
QSV55_05245 CDS
T09191
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mboc
Macrococcus bovicus
Pathway
mboc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QSV55_05245 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboc03019
]
QSV55_05245 (rny)
Messenger RNA biogenesis [BR:
mboc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QSV55_05245 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7217
Motif
Other DBs
NCBI-ProteinID:
WJP98716
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All DBs
Position
LI0213:955489..957042
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AA seq
517 aa
AA seq
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MVILLYILLGILVGVAAGYYLAKTNLTNQQIQARQTGEHIVKEARKEAESLKKEKLLEAK
EEHQLRSDRLEDEYRHRRADLSRQEARLLQKEENLDRKSELLDKKDELLEQKESKIEAKQ
QQVDALEQSVQDIIARHEQELIRISGLTQEEAKQEIIDQVEDELSHDIAVLIKEKEQEVK
DTVDKKAKMLLATTVQRLAADHTSESTVSVINLPNDEMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVILSGFDPIRREVAKIALQNLVSDGRIHPGRIEEMVEKAKKSVDESIREAG
EAATFELGIHNLHPDLVKILGRMKFRTSYGQNVLKHSVEVAHLAGMMAAELGEDVTLAKR
AGLLHDIGKAIDHEVEGSHVEIGVDLAKKYKEHPVVINAIHSHHGDIEPNSVISVLVAAA
DALSAARPGARRETLENYVRRLERLEQISESYDGVEKSFAIQAGREIRIIVSPEEVDDLK
AHRLARDIKNQIEEELQYPGHIKVTVVREMRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggttatcctcttatacattttgcttggcatccttgtaggtgttgctgcaggttattat
ctagcaaaaacgaatttgacgaaccagcagattcaggcacggcaaactggtgagcatatt
gtgaaagaagctagaaaagaagccgaaagtcttaaaaaagaaaaactgctagaagctaaa
gaagaacatcagctgcgcagtgatcgtctggaagacgaatatcgccatagacgagcagat
ctttcaagacaagaagcacgattacttcaaaaagaagaaaacttagatcgaaaaagtgaa
ctcttagataaaaaagatgagcttttagaacaaaaagaatctaaaattgaagctaaacaa
cagcaagttgatgcgctggagcaaagtgttcaagatattatcgccagacatgaacaggaa
ttaatacgcatctccggactgactcaagaagaagcgaaacaggaaattatcgaccaggtt
gaagatgaactttctcatgatatagccgtgctgatcaaagagaaagagcaagaagtcaaa
gacacagtcgataagaaagccaaaatgttacttgcgactactgttcagcgcttagccgct
gatcatacttcagaatcaacggtatcagtgatcaatctgccgaatgatgagatgaaaggt
cgtattattggtcgggaaggacgaaatatcagaacacttgaaacattaacgggtattgat
ctgattattgacgatacaccggaggcagtgatactgtcgggctttgatccaatcagacgg
gaagtggcgaaaatcgcgctgcagaacctggtttctgatggtcgtattcatccaggtcgt
atcgaagaaatggttgaaaaagcgaaaaaatcagtggatgaaagtatccgcgaagcaggt
gaggctgcgacatttgaactgggtatccacaatctacatccggacttagtgaaaatactc
ggccgtatgaagttcagaacgagctacggccagaatgtgctgaaacactcagtagaggtg
gcgcatttagcaggcatgatggcagcagaactcggtgaagatgtgacactcgctaagcgg
gcaggacttcttcatgatatcggtaaagccattgaccatgaggtggaaggcagtcatgtt
gaaatcggtgtagaccttgcgaagaaatacaaggagcatccggtcgtcatcaatgcaatc
cattcacatcatggtgacatcgaacctaattcggtcatttcggtcttagtggcggctgcc
gatgcactgagtgcagctagaccaggtgctagacgcgagactttggaaaattacgtcaga
cgtctggaacgacttgaacagatttcagagagctatgacggcgtcgagaaatcatttgcg
atccaggcgggacgagaaatcagaattatcgtctctcctgaggaagtggatgatctgaag
gcccatcgattagcgcgtgatatcaagaatcagatcgaagaagaactgcagtatccaggt
catattaaagtaacagtcgtacgtgaaatgcgtgcggttgaatatgctaaataa
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