Macrococcus bovicus: QSV55_09415
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Entry
QSV55_09415 CDS
T09191
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mboc
Macrococcus bovicus
Brite
KEGG Orthology (KO) [BR:
mboc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mboc03009
]
QSV55_09415 (rlmD)
Enzymes [BR:
mboc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
QSV55_09415 (rlmD)
Ribosome biogenesis [BR:
mboc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QSV55_09415 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
TPMT
Methyltransf_11
N6_N4_Mtase
Methyltransf_12
DOT1
RrnaAD
DUF2802
PCMT
PDGF
Motif
Other DBs
NCBI-ProteinID:
WJP97457
LinkDB
All DBs
Position
LI0213:complement(1712771..1714117)
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AA seq
448 aa
AA seq
DB search
MKKNDILTGTVVDYTHEGNGVVKIEGYPIFIPQTVKNETVTFKLIKQNKGFGIGKVLSID
TESPDRVTPPCIYYQQCGGCNIQHLNYQAQLTMKENQVKNLVRKMTKLDIPVREIIGMEN
PWRYRNKSQLPVQYREGIVTGFYRPRSHDIVPIEECLIQKESHDELMNTIRQLLTQYNVS
IYDERRHRGNLRHIMLRSGTTVNETMVVFVTKSRHLPELEQIADELMAQFPYVTSIRQNI
NSEKTNVILGSQSRTIRGHDYIHDQLDQLTFEISDMSFYQVNHEQTEKLYRQALDYAELT
ASQNVIDAYCGIGTIGLFMAAHAERVYGVEIVEKAIEDAKRNAALNHLSNTHFEAGKAED
IILKWREEGIRPDVVMVDPPRKGCDAVFIETLLELTPQRIVYVSCNPSTLMRDIQLLETK
YHIDEITPVDMFPQTTHVEAVCKMTLKD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacgatatattaacaggtacagtcgtcgattatacgcacgaaggtaacggt
gttgtcaaaatagaaggttatcctatctttatcccgcagacagtgaagaacgaaacagtc
actttcaagctgatcaagcagaataaagggtttggtatcggtaaagtgctgtcaattgac
acagaaagcccggaccgtgtaacgccaccctgcatctattatcagcagtgcggcggctgt
aatatacagcatctgaattatcaggcgcagctcaccatgaaggaaaatcaggtgaagaat
ttagtccgcaaaatgacgaagctcgatattccggtgcgcgagattataggaatggagaat
ccttggcgttatcgcaataagagtcagctgcccgtccagtaccgggagggcattgtaacg
ggattctacagaccccggtcgcatgatatagtgccgatagaagaatgtctgattcagaag
gagagtcacgatgaactgatgaatacgattcgtcagctgctcacgcaatacaatgtcagt
atttatgatgaacggcgccatagaggcaacctgagacatatcatgctccgcagcggcacg
acagtgaatgaaacgatggtcgtttttgtcactaaaagccggcatctgcctgaacttgaa
cagattgcggatgaactgatggctcagtttccgtatgtgacaagtatcagacagaatatc
aatagtgagaagacgaatgtcatcctcggcagccagtccagaacgatccgcggccatgat
tatatacacgatcaactggatcagctgacatttgagatttcagatatgagtttctatcag
gtcaatcacgagcagacagaaaaactgtaccgtcaggcgctggattacgcagaactgaca
gccagtcagaacgtcatcgatgcttactgcggcatcggtacgatcggcttgtttatggca
gcacatgctgaacgggtctacggtgtggaaatagtggagaaagcgatagaggacgccaaa
cggaatgcagcgcttaatcacttatccaatacacactttgaagccggtaaagcagaagat
attattctgaagtggcgcgaggaaggcatcagaccggatgtcgtgatggttgatccgccg
cgtaaaggctgcgatgccgtctttattgagactctacttgaactgacgcctcagcgtatc
gtctatgtatcctgtaatccttcaaccttgatgcgtgacattcagctgctggagacaaaa
tatcatatcgatgagatcacgccggtcgatatgttcccgcagacgacccatgttgaagca
gtctgcaagatgaccttgaaggattag
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