Macrococcus bovicus: QSV55_10000
Help
Entry
QSV55_10000 CDS
T09191
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mboc
Macrococcus bovicus
Pathway
mboc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QSV55_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboc03019
]
QSV55_10000
03009 Ribosome biogenesis [BR:
mboc03009
]
QSV55_10000
Enzymes [BR:
mboc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QSV55_10000
Messenger RNA biogenesis [BR:
mboc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QSV55_10000
Ribosome biogenesis [BR:
mboc03009
]
Prokaryotic type
rRNA helicases
QSV55_10000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
STI1-HOP_DP
AAA_30
NAT10_TcmA_helicase
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJP97561
LinkDB
All DBs
Position
LI0213:complement(1826245..1827720)
Genome browser
AA seq
491 aa
AA seq
DB search
MQKFRDLGISEPTIQSLEKLGFTEPTAIQTESIPYTLAGRDVLGQAQTGTGKTGAFGIPL
IEKVKHHEGIQSLILAPTRELAVQVADQLKAFGRGQGVQVVTIFGGMPIDRQIRELKRKP
QIVVGTPGRVIDHLNRRTLKTDQITTLILDEADEMMNMGFIDDMRFIMDKLPKENRQTLL
FSATMPRAIQELVQKFMNDPVVVKTMTNVDSNPDIDEFYTIVKELEKFDTFTNFLDVHSP
ELAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDSIDILVATDVA
ARGLDISGVSHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPIEMDYIRQIEKEKN
RTMKALRPPTPGEVMKSRESEVKKKVAEWVAKPSEERIETIAQGLIEEYGDVKLVTSLLQ
ELIQSNNDVDVQLTFEKPLGRKGGKSSYGRRGGNGGNRNFKSRDSKDNRRRKPAAGKSKN
FKGRTFADHKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacttaggtattagcgaacctacaatccaatcgctagagaagtta
ggttttacagaacctacagcgatccagactgaaagtattccatacactttggctggcaga
gatgtactaggacaagcgcagaccggcacaggtaagacaggtgcattcggtataccttta
attgagaaagtaaagcatcacgaagggattcagagtttaattctcgcccctactcgtgag
ctggctgtccaagtggcagaccagctgaaagcattcggccgcggacaaggtgttcaggtt
gtcactattttcggtggtatgcctatcgaccgtcagattcgcgaactgaaaagaaagcct
caaatcgtagtcggaacacccggccgcgtgattgatcacttaaatcgtcgtacactgaag
acagatcagataacgacattgatcctcgatgaagcggatgaaatgatgaacatgggcttc
atcgatgatatgcgttttatcatggataaattgccgaaagagaatcgtcagacgttgtta
ttctcagcgacgatgcctagagccatccaggaacttgttcagaagttcatgaatgacccg
gtcgtagttaaaacgatgacaaacgttgactctaatccggatatcgacgaattctacaca
atcgtcaaagaactagagaagtttgatacatttacgaacttccttgatgtccacagcccg
gaacttgcaatcgtcttcggccgtacaaaacgccgtgtagatgagctgacaagcgcgctt
atttctaaaggttaccgtgcagaaggtctgcatggtgatatcacgcaggccaaacgtctt
gaagttctgaagaaattcaagaacgattccatcgatatccttgtcgcaacagacgttgca
gcacgtggattagatatttcaggcgtttcacacgtctataactttgatattcctcaggac
gtcgaaagttatacacaccgtatcggacgtacaggccgtgcaggtaaacatggtatggcg
atctcattcgtcaacccgattgaaatggattatatccgtcagatcgaaaaagagaaaaac
cgtacgatgaaagcactgcgtccacctacaccaggtgaagtgatgaaatcacgtgagagc
gaagttaagaaaaaagtagcggaatgggtagctaaaccgtcagaagaacgtattgaaaca
atcgcgcaaggtctgattgaagaatacggtgatgtgaagttagtgacatcattactgcag
gagctgatccaatctaataacgatgtggatgttcagctgacatttgaaaaaccgcttggc
cgtaaaggtggtaaatcatcatatggccgtcggggtggtaacggtggcaaccgtaacttc
aaaagccgcgattctaaagataaccgtcgtcgtaaaccggccgcaggtaaatccaagaat
ttcaaaggacgtacatttgctgaccacaagaaataa
DBGET
integrated database retrieval system
