Macrococcus bovicus: QSV55_10710
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Entry
QSV55_10710 CDS
T09191
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mboc
Macrococcus bovicus
Pathway
mboc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mboc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QSV55_10710 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mboc03021
]
QSV55_10710 (rpoC)
03400 DNA repair and recombination proteins [BR:
mboc03400
]
QSV55_10710 (rpoC)
Enzymes [BR:
mboc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QSV55_10710 (rpoC)
Transcription machinery [BR:
mboc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QSV55_10710 (rpoC)
DNA repair and recombination proteins [BR:
mboc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QSV55_10710 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WJP97696
LinkDB
All DBs
Position
LI0213:complement(1957673..1961290)
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRSLEEVIYFASYAVIDPGPTGLEKKSLLSEREYREYYDKFPGQFTAKMGAEAIKDLLT
TIDLDDELKSLREELESATGQRLTRAIKRLEVVESFRNSGNDPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEREIATNIKNAKGKIERMDAEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERRGSIGEGRIFKDANEVIKAYTNGFVHLHSRIAVS
ASSFNNPTFTDKQNTQLLITSVGKVIFNEIMPESFPFINEPTLTNLEEKTPEQYFVDATD
IPEEGLLKYLENTPLVKPFNKKFLGQVIAEVFNRFHITDTSMMLDRMKDLGFRYSSRAGI
TVGVSDIVVLPDKQQIISEAEEKVDKVTKQFTRGLITESERYAAVIDIWTKAKDEIQARL
MNSLDDLNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREADCGTDRGLLVSAIREGSELI
EPFIERLEGRYSRETVRHPETKEVLVKSNELITPEIAKAIVDAGIEEMHIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRI
QELFEARNPKGQAIISEINGEVVEINIVKDRMQEIKVKGENEVRPYLAPATARLKVEVGS
KVSRGEVMTEGSIEPKELLAVAGLNATQSYLLKEVQKVYRMQGVEISDKHVEVMVRQMLR
KVRIIEAGDTNLLPGALVDIHVFTDANREIFKNRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSGVEYEKDAPEFEPEE
AFVTE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataactttcattacatgaagataggtctcgcttcacctgaaaaaatc
cgttcatggagttttggtgaagttaaaaagccagaaacaattaactaccgtacattaaaa
ccagagagagacggtttattctgcgaaaagattttcgggccaacaaaagactgggaatgt
agctgtgggaaatacaaacgtgttcgttacaaagggatggtctgcgaccgttgtggtgtt
gaagtaacgaaatctaaagttcgccgtgaacgtatgggtcacatcgagcttgcagcgcca
gtttcacatatctggtacttcaaaggtattccgagccgtatgggtcttttactcgatatg
tctcctcgttcgcttgaagaagtgatttacttcgcttcttatgcagtgattgatccaggt
ccgacaggtcttgagaaaaaatctttactgtcagaacgtgaataccgtgaatattatgat
aaattcccgggtcaatttacggcgaagatgggtgcagaagccattaaagatttattgaca
acaatcgatcttgatgacgaactgaaatctttacgtgaagaactggaatcagctacaggt
cagcgtctgacaagagcaatcaaacgtctggaagtagtggaatcattccgtaattcaggt
aatgacccatcttggatgatcttagatgtactgccgatcattccaccggaaatccgtccg
atggttcagcttgacgggggtcgtttcgcgacaagtgacttaaacgatttatatcgtcgt
gtcatcaaccgtaacaaccgtctgaagcgcctgcttgatttaggtgcgcctggcatcatc
gtgcagaacgaaaaacgtatgctgcaagaagcggtagatgcgctgattgataatggtcgt
cgtggccgtccggtaacaggaccgggtaaccgcccgctgaaatctttatcgcatatgtta
aaaggtaaacaaggtcgtttccgtcagaacttacttggtaaacgtgtagactattcaggt
cgttcagttatcgttgtaggtccaaaccttaagatgtatcaatgtggtcttccaaaagaa
atggcactcgaattattcaagccgtttgtgatgaaagaacttgtagaacgtgaaattgct
acgaacatcaagaacgctaaaggtaaaatcgagcgtatggatgctgaagtatgggatgta
ttagaagatgtcatccgtgaacatcctgttctgctgaaccgtgcaccgacgcttcacaga
ttaggtatccaggcctttgaaccaacccttgtagaaggacgtgcaatccgtcttcatccg
cttgtaacaacagcttacaatgccgatttcgatggtgaccagatggccgttcacgtaccg
ttatctaaagaagcgcaggcagaagcgcgtatgctgatgcttgcggcacagaacatcctg
aacccgaaagatggtaagccggttgtaacaccttctcaggatatggtcttaggtaactac
tacctgactcttgagcgccgtggttctatcggtgagggacgcatcttcaaggatgcaaat
gaggtcatcaaagcctatacaaatggtttcgttcacctgcattcaagaatcgcagtgagt
gcctcatcattcaacaacccgaccttcactgataaacagaatacacagctgctgattaca
agtgtcggaaaagtcatcttcaatgaaatcatgccggaatcgttcccgttcatcaacgag
ccgactttgacaaaccttgaagaaaaaacgcctgaacagtactttgtggatgcgacggat
attccggaagaaggattactcaaatatctggagaatacaccgctcgttaaaccattcaac
aaaaagttcctcggtcaagtcatcgctgaagtcttcaatcgtttccacatcactgataca
tcaatgatgcttgatagaatgaaagacttaggtttccgttattcttcacgtgcaggtatc
acagttggtgtatctgatatcgtggtattaccggataaacaacagatcatcagtgaagca
gaagagaaagtcgacaaagtaacgaaacagttcacacgtggtttaatcactgaaagcgaa
cgttatgcagccgtcattgatatctggactaaagcgaaagacgagattcaagcacgtctg
atgaactctcttgatgaccttaacccgatcttcatgatgagtgactctggtgcccgtggt
aatgcctctaacttcacgcagcttgcgggtatgcgtggtctgatggccaacccggctggt
cgaatcatcgagttacctatcaaatcttcattccgtgaaggtctgacagtacttgaatac
ttcatctctacacacggtgcgcgtaaaggtcttgccgatacagcgctgaaaacagctgac
tcaggatacttaacacgtcgtcttgtagacgtggcacaagatgtcattgtccgtgaagca
gactgtggtacagaccggggtctcttagtctctgctatccgcgaaggttcagagttgatc
gagccattcattgagcgtttagaaggacgttactcccgtgagacagtccgtcatccggag
acaaaagaagtcctggtcaaatcaaatgaactgatcactcctgaaatcgcaaaagcaatt
gtggatgcaggtattgaagaaatgcatatccgttcagccttcacatgtaatacacgtcac
ggtgtatgtgaaaaatgttacggtaaaaacctggcaacaggggaaaaagtggaagtcggt
gaagcagtcggtaccatcgctgcacaatctatcggtgaaccaggtacacagcttacaatg
cgtaccttccatacaggtggggtagccggtgccgatattacacaaggtttaccgcgtatc
caggagttattcgaagcgcgtaacccgaaaggtcaagcgatcatctctgaaatcaacggt
gaagtcgttgaaatcaatatcgttaaagaccgtatgcaggaaatcaaagtcaaaggtgaa
aacgaagtacgtccgtacttagcaccagcgacagctcgtctgaaagtagaggtcggttct
aaagtcagccgcggtgaagtcatgacggaaggttcaattgaaccgaaggaactacttgct
gtagcaggtctgaacgcgacacaaagctacctgcttaaagaggtacagaaagtttaccgt
atgcaaggggtagaaatttcagataagcacgttgaagtcatggtccgtcagatgttacgt
aaagtccgtatcattgaagcgggagatacgaatctcctgccgggcgcactggtagacatt
catgtctttacagatgctaaccgtgagatcttcaaaaacagaaaacgtccggcgacagcg
aaacctgtcttactgggtattacaaaagcatcacttgaaacagaaagtttcttatctgct
gcatcattccaggagaccacacgtgtgttaactgatgctgcgatcaaaggtaaacgtgat
gacttgctcggtcttaaagagaacgttattatcggtaaattaattcctgctggtacaggt
atgagacgttattcaggcgttgaatacgaaaaagatgcaccggaatttgaaccggaagaa
gcgtttgtgactgaatag
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integrated database retrieval system
