Macrococcoides bohemicum: HT586_01815
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Entry
HT586_01815 CDS
T07164
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HT586_01815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mboe03021
]
HT586_01815
03400 DNA repair and recombination proteins [BR:
mboe03400
]
HT586_01815
Enzymes [BR:
mboe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HT586_01815
Transcription machinery [BR:
mboe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HT586_01815
DNA repair and recombination proteins [BR:
mboe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HT586_01815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QRN48932
LinkDB
All DBs
Position
335175..336119
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETVEISEDSKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKNIEIEG
VLHEFSAVENVVEDVTTMIMNIKKLALKIYSDEDKTLEIDVKDEGVVTAKDIMHDSDVEI
LNPDLKIATVSKGGHLKMRLVANAGRGYTLAEDNNTSDLPIGVIPVDSIYTPVERVNYTV
ENTRVGQSTNFDKLTLDVWTDGSLTPQEAISLGAKIMTEHLNIFVDLTDEAQNAEIMIEK
EEDHKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
FKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaagcctagaattgagacagtggaaattagtgaagattctaaattc
ggtaaattcgtagttgaaccgttagaacgtggttatggtacaacattaggaaactcctta
cgtcgtatcctattatcttcattaccaggtgcggctgttaagaatattgaaatcgaaggt
gtcttacatgaattctcagctgttgagaatgtagtggaagatgttacaacaatgatcatg
aacatcaaaaagcttgcgcttaaaatctactctgatgaagataaaacgcttgaaattgat
gtgaaagatgaaggcgttgttactgcgaaagatattatgcatgacagtgatgttgaaatt
ttaaatcctgatttaaaaattgcaacagtatctaaaggtggacacttaaaaatgcgtttg
gttgcaaatgcaggacgtggttacactttagctgaagataataacacaagtgatttacca
attggagtaattccagttgattcaatctacacaccagttgagcgtgtaaactacacagta
gaaaatacacgtgttggacaaagtactaactttgacaaattaactttagatgtatggact
gacggatcattaacaccacaagaagcaatttctttaggtgctaagattatgacagaacat
ttaaacatcttcgttgacttaactgatgaagcacaaaatgctgaaatcatgattgaaaaa
gaagaagatcacaaagaaaaagtacttgaaatgtcgattgaagaacttgatttatcagtt
cgttcttataactgtctgaaacgtgcaggtattaattctgttcaggaattagccgacaaa
tcagaagctgatatgatgaaagttcgtaacttaggacgcaagtctttagaagaagttaaa
tttaaattagaagacttaggtctcggattaagaaaagaagactag
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