Macrococcoides bohemicum: HT586_02755
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Entry
HT586_02755 CDS
T07164
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HT586_02755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboe03019
]
HT586_02755
03400 DNA repair and recombination proteins [BR:
mboe03400
]
HT586_02755
Enzymes [BR:
mboe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HT586_02755
Messenger RNA biogenesis [BR:
mboe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HT586_02755
DNA repair and recombination proteins [BR:
mboe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HT586_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QRN49109
LinkDB
All DBs
Position
517077..520292
Genome browser
AA seq
1071 aa
AA seq
DB search
MINHDSSLKSLYILEGFSISDLEKESNKLFDFELNGFLDEHYAVGSAEKRKIVREVRNYD
KEYAWVTPEEFFIYGEVIQYEFDEIIILKNNIYPGVYPHNYALKDIHKFYENNFTNPKYS
ATDFDEFINAIYGMVIEFNHQYYVIYNGFLSEIEEMTIRTVYHGQQPLEVTEDVNAIESN
QLIDISTEQSKVIELIEKLRNTTQDYYIMFANMDEYSKIQDYLETLNNEFDGRIKVVISS
SQKRIIARENDYTRILKQYWGYDGFKELPFYKNTTASREVVNISQAQIIDDIVSQAEKGM
NGELPRDIFITASTGAGKSLMFQIPALYLAEQHKDKNPITIVISPLIGLMNDQTESLKRR
NIKNAKTINSGISPLEKEKIKAEIKAGSIDLLYISSETLLSRGDIANLIGERPIGLFIVD
EAHIVTTWGKSFRPDYWYMGSYVSKLRANQTFPIVTFTATAIVEGKNSMLDEIKSTLNLT
SVIKYIGSVKKDNLLLQISNVEKEDKTKFKNDAMKIKTELTLKTVKDALKKNEKLLIYFP
TIKQIHSFLKYVDTNAERTKDKIAVYYGRLAPHEKELNFNAFLNGEKPVILATKAFGMGI
DVPDIKKVYHYGMTGNVLDFVQEIGRAARDPKMIGHAKVDYLQKDFNEVKKMYAMSSIKK
SELLAVMDKLIKIYKANRYKRNLVINPKEFAHIFAKGETESSNDDPENKVKLALLTIEND
FKNNIKYPPIVTRPGEVNGEDYILVNEDLLSTIELKKYAPFFEFVEHTNGEYYKQVYKFK
TGEYWKKYYADRYSYPQFKFFMAIGDDELQFDKLLKKLPIAYNITIKEEDVSDLQKEILE
ILNQCEEAFRTFAVKGNHFDDKQLAYQLRTILKSKFNEQFSMLLINSLLKASEVNKVSGI
TVLADDKFKISNTYNDIFDKLRYYVDKLFNKEISVAMPPQQYSYYIVRNQQEEINNYTII
LGLLEGLGKLSYHLSSGETPTLSLRINSVYPLENAVAKPKKYTNEILNHQYTSHKIGLAM
LKYLFTKEFDGDSLQDKQLKHTQWFWEQIENYFFGIIPDEVRNEVFVKKVD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccacgattctagtttaaaaagtttatacatattagaaggatttagtataagt
gatttagaaaaagaaagtaataagttatttgattttgaactcaatggttttttggatgag
cattacgcggtaggtagtgctgagaaaagaaaaatcgtcagagaagttagaaactacgat
aaagaatatgcttgggtgacgccagaggaattctttatctatggagaagtaatacaatat
gaatttgatgaaattatcatcttaaaaaataatatttatcctggagtatatccacataac
tatgcacttaaagatatacataagttctatgaaaataactttaccaatcctaaatatagc
gccacagattttgatgaatttattaatgcaatctatggtatggtaatcgagtttaaccat
caatactacgtaatctataacggatttctaagcgagattgaagagatgacaattcgcact
gtctatcatggtcaacaacctcttgaagttacagaagatgttaatgcaattgaatcaaat
caactcattgatattagtacggagcagtcgaaagtaatagaattaattgagaaactaaga
aatactacacaagattattatatcatgttcgcaaatatggatgagtatagtaaaatccaa
gattaccttgaaacattgaataatgaattcgatggacgtattaaagttgtgatcagttct
tctcaaaagagaattattgcaagagaaaatgattatacacgaatcttgaaacaatattgg
ggttatgatggattcaaagaactgccattctataaaaacactacagcatctagagaagta
gttaacataagtcaggctcaaattatcgatgatatcgtgagccaagcagaaaagggtatg
aatggagaactgccacgcgacatctttattacggcatctaccggagcaggaaaatcgttg
atgttccagattccagccctgtatttagccgagcagcataaagataaaaatccgattaca
atcgtcatttcaccactcattggtttaatgaatgatcagacagaaagcttaaagcgaaga
aatatcaagaatgctaagacgattaactctggtatttctccattagaaaaagaaaaaata
aaagcagagattaaagcgggtagtattgaccttctttacatctcttctgaaacattatta
agtcgtggtgatatcgcaaatttaataggtgaacgaccaattggactatttattgtagat
gaagcgcatatcgtaacgacatggggtaaaagttttagacctgattattggtatatgggt
agctatgtatcaaaactgagagcgaatcagacatttccgattgtaacctttaccgcgaca
gcgatagtcgaaggtaaaaatagtatgttagatgaaattaaatctacattaaaccttaca
tctgtcattaaatatatcggaagcgttaagaaggataacctgctattgcagatatcgaac
gttgaaaaagaagataagacgaaatttaaaaatgatgcaatgaagataaaaacggagtta
acacttaaaacagttaaggacgctttaaaaaagaatgaaaaactacttatttacttcccg
acgattaaacaaattcacagcttcttaaaatatgtagatacgaatgccgaaagaacaaaa
gataagatagcagtttattatggaagacttgcacctcatgaaaaggaactgaatttcaat
gctttcttaaatggtgaaaaacccgttattttagcgacaaaagcatttggtatgggaatt
gatgtacctgatattaaaaaagtctatcattatggtatgacgggaaatgtgctagatttc
gtacaagaaataggtcgtgcagcgcgtgatcctaagatgataggccatgctaaagtagat
tacctacaaaaagacttcaatgaagtgaagaagatgtatgccatgtcctcaatcaaaaaa
tcagaattactcgcagtgatggataaattaattaaaatttataaagcgaatcgttataag
cgtaacttagtaatcaatccgaaagaatttgcacatatatttgctaaaggtgagacagaa
tcatctaacgatgacccagagaacaaagtgaagctcgcacttcttacaatcgagaatgat
tttaagaataacattaaatatccacctattgtaacacgtcctggagaagtaaatggtgaa
gattatatcctcgtaaacgaggacttattatctaccatagaacttaagaagtatgcaccc
ttctttgaatttgtagaacatacaaatggtgagtactataaacaagtatataaatttaag
acaggcgaatactggaaaaaatattatgcggatagatattcatatcctcagtttaagttc
tttatggcaatcggtgatgatgaacttcaatttgataaactacttaagaaactaccgatt
gcatacaacattacgattaaagaagaagacgtaagcgatcttcagaaagaaatacttgag
atattaaatcaatgtgaagaggcgtttagaacatttgctgttaaagggaatcattttgac
gacaaacaactcgcttatcaattaagaacaatattaaaatccaaatttaacgagcaattc
agcatgttactgataaatagtttgttaaaagcaagtgaagtaaataaagtaagcggcatc
acagtattagctgatgataagttcaagatatcgaatacttataacgatatatttgataaa
ttacgctactatgtagacaaattatttaataaagaaatatcagttgcaatgccaccacaa
caatatagttattacattgtaagaaatcagcaagaagagattaataactatactattatt
cttggtttactagaaggactcggaaaattaagctatcacctttccagtggagaaacaccg
acattatcacttcgcatcaactcagtgtatccgcttgaaaacgctgtagctaagccgaag
aagtatacgaatgaaatcttaaatcatcaatacacttctcataaaatagggttagcaatg
ttgaaatatttatttactaaagaatttgatggcgatagtcttcaagataagcaattgaaa
catacacaatggttctgggagcagatagagaattatttcttcggaattattccagatgaa
gttagaaacgaagtgtttgtgaagaaagtggattaa
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