Macrococcoides bohemicum: HT586_05980
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Entry
HT586_05980 CDS
T07164
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HT586_05980 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboe03019
]
HT586_05980 (rny)
Messenger RNA biogenesis [BR:
mboe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HT586_05980 (rny)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
YtxH
KH_2
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
QRN49743
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All DBs
Position
1166974..1168533
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AA seq
519 aa
AA seq
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MELLTLLYILLGIILGVGVGYVLAKNSLTNQQNQARTTAEHIISEANKEAESLKKEKLLE
AKEENQVRSDRLEAEYKERRSDLARQEARLLQKEENLDRKSELLDKKDELLEQKESKIEE
KQQHVDALEQSVQDIIVKHEQELTRISGLTQEEAKQEIIDQVEDELTHDIAVMVKEKEQE
AKMQVDKKAKMVLATTVQRLAAEHTSESTVSVINLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIAKTALEALVSDGRIHPGRIEEMVEKARKSVDEIIRE
AGEAATFELGIHNLHPDLVKILGRMKFRTSYGQNVLKHSIEVAHLSGMLAAELGEDITLA
KRAGLLHDIGKAIDHEVEGSHVEIGVDLAKKYREHPTVINAIHSHHGDIEPNSVISVLVA
AADALSAARPGARRETLENYVRRLERLEQISESYDGVEKSFAIQAGREIRIIVSPEDVDD
LKAHRIARDIKNQIEEELQYPGHIKVTVVREMRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtggaactattaaccctcttatacattttgcttggaataattctaggtgttggtgtaggg
tatgtattagcaaaaaatagcttaactaatcagcaaaatcaagcgcgtacaactgctgaa
catattattagtgaagcaaacaaagaagctgaaagtcttaaaaaggaaaaattacttgaa
gcaaaagaagagaatcaagtaagaagtgatcgtttagaagcggagtataaagaacgtcgt
tcagaccttgcaagacaagaagcaagactacttcaaaaagaagaaaacttagatcgtaaa
agtgaacttttagataaaaaggatgaacttttagaacaaaaagaatctaaaattgaagaa
aaacaacaacatgtagatgcgttagagcaaagtgtccaagacattatagtaaaacatgaa
caagaattaacacgcatctccggactgacgcaagaagaagcaaaacaggaaatcattgat
caagttgaagatgaattaacacatgacattgctgttatggtgaaagaaaaagaacaagaa
gcaaaaatgcaggttgataaaaaagccaaaatggtacttgcaactacagttcaacgttta
gcagcagaacatacttcagaatcaactgtatcagtaattaaccttccaaatgatgaaatg
aaaggtagaattatcggtcgtgaaggtcgaaatattcgtacattagaaacgttaacaggt
attgatttaattattgatgatacacctgaagcggtcattttatctggattcgacccaatc
agacgtgaaattgctaaaacagcattagaagctttagtttcagatggaagaattcaccct
ggacgtatagaagagatggttgaaaaagcgcgtaaatctgttgacgaaattattcgtgaa
gcaggggaagcagcgacttttgaacttggtatacataatttacatccagacttagtgaag
attttaggacgcatgaaattccgtacgagttatgggcaaaatgtgctgaaacattctatt
gaagtagcacatttatcaggaatgcttgcagctgaacttggtgaagatattactttagca
aaacgtgcaggattattacatgatatcggtaaagcgattgaccatgaagttgaaggatcg
catgttgaaattggtgtggatttagcgaagaaatatcgtgaacatcctacagtaattaat
gcgattcactcacatcatggtgatattgaaccgaatagtgttatctcagtacttgttgca
gcagctgatgcgttaagcgcagcaagacctggagcaagaagagaaacattagagaattat
gtaagacgtcttgaacgattggaacaaatctctgaaagttatgatggagttgaaaaatca
tttgcgattcaagctggacgcgagattagaattatcgtttcgccagaagacgttgatgat
ttaaaagcacatcgtattgcaagagatattaaaaatcagattgaagaagagttacaatat
cctggtcacattaaagtgacagtcgtcagagaaatgcgtgcgattgaatacgcgaaataa
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