Macrococcoides bohemicum: HT586_07260
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Entry
HT586_07260 CDS
T07164
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HT586_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboe03019
]
HT586_07260
03400 DNA repair and recombination proteins [BR:
mboe03400
]
HT586_07260
Enzymes [BR:
mboe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HT586_07260
Messenger RNA biogenesis [BR:
mboe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HT586_07260
DNA repair and recombination proteins [BR:
mboe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HT586_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QRN49996
LinkDB
All DBs
Position
complement(1409199..1410629)
Genome browser
AA seq
476 aa
AA seq
DB search
MKAINKILQETFGIESLRENQIKIVQKILEGSDVLALLPTGSGKSLTFQLPMLINNKKTI
VISPLIALMEDQVMQLKQKKIKACCIHSQLDDMDKQLLLSHVETYDFIYCSPEWLVTNGL
NYLKHYPCEAIVIDEAHCISEWGFEFRPHYLMIDEIVSYFDAQVIALTATANDQVISDIQ
HVIKRKLTVMDYLTERENIFLSVVNTNDDTDKLSFILEALKASAATVIYFSSKKQVEYVY
RYLLAQGIMVERYHADMQYEERMSVQQRFMNDEIQVICATNAFGMGVNKSNIRTVIHYHM
PKSIFQFIQEIGRGGRDGELSQSILLYSPNDEILPYRLNELNELSVAEIDLYFQGAVLSE
EKQILLKILSEKYNRKEVVEKIKHHQQMKRTALIQMMEYIHEKNCFTQKLNYFSLNMQNV
TDIQSMEQEKNSLKCKSCAQCNEQVKISFEQQNYHIQKKFGKTLLNQLFNDLYVFT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatcaataaaattttacaagagacctttggtatagaaagcttacgagaaaat
caaattaaaattgtgcaaaagattcttgaggggagtgatgtattagcgcttctaccaaca
ggttcagggaaatcactaactttccagttaccaatgctgataaataataaaaagaccatt
gtaatatcaccattaattgcattaatggaagatcaggttatgcagcttaaacaaaaaaag
attaaagcatgctgtatacacagtcagttagatgatatggacaaacaattattgttatct
catgttgaaacatatgattttatatactgttcacctgaatggcttgttacaaatggtctg
aattatttaaagcactatccctgtgaagctatcgttatagatgaagcacattgcatttcg
gagtggggatttgaattcagaccccattatttgatgattgatgaaatagtatcatatttt
gatgcacaggttattgcattaaccgccactgcaaatgatcaagtaatctcagatattcag
cacgttattaaaaggaaattaactgtaatggattatttaacggagagggagaatatcttt
ttatccgtggtaaatacaaatgatgatacagacaaattgtcctttattttagaagcttta
aaagcatctgctgcaactgtaatttatttttcttcaaagaaacaagtcgaatacgtatat
agatatcttttagcgcaaggtataatggtggaacgctatcatgcagatatgcaatatgaa
gaaaggatgtccgtacagcagcgttttatgaatgatgaaatacaagtgatttgtgcaacg
aatgcatttggtatgggcgttaataaatcaaatataagaacagtaatacattatcatatg
ccaaaatcaatttttcagtttattcaggagataggtagaggaggcagagatggtgaatta
tcacaatctattttgttgtatagtcctaacgatgagatacttccatatcgactcaatgaa
ttaaatgaattgagtgtggcagaaatagatttgtattttcaaggtgcagtactatctgaa
gaaaagcaaatattgttaaaaattctttcggaaaagtataatagaaaagaagtagtagaa
aaaatcaagcatcaccagcaaatgaaacgaacagcattgatacagatgatggaatatata
catgaaaaaaattgttttacgcaaaaactaaattatttcagtttaaacatgcaaaatgta
acggatatacaaagtatggagcaagaaaaaaatagtttgaaatgtaaaagttgtgcgcaa
tgcaatgaacaagttaaaatctcgtttgaacagcaaaattatcatattcaaaaaaagttc
ggaaaaacgcttctaaatcaactgtttaatgatttatatgtctttacttaa
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