Macrococcoides bohemicum: HT586_07815
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Entry
HT586_07815 CDS
T07164
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HT586_07815 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mboe03021
]
HT586_07815 (rpoD)
Transcription machinery [BR:
mboe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HT586_07815 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
QRN50106
LinkDB
All DBs
Position
complement(1505693..1506796)
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AA seq
367 aa
AA seq
DB search
MAAKKSDATTKIAELLTLEQVKTQLLETGKKNGHLSHEEIADKLQNFEMDSDQMDEFFEA
IAENDITLINEKDANDTDDKINLNDLSAPPGVKINDPVRMYLKEIGRVNLLSAEEEIELA
KRIEQGDEEAKARLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFTKGF
KFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPSPEEIGE
EMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDAQSPADHAAYELLKEQLE
DVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSK
RLKDFMD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaagaaatccgatgcgacaacaaaaatcgcagaattattaacattagaacaa
gtaaaaacacaattacttgagacaggtaagaagaatggacatttaagtcacgaagaaata
gctgataaattacaaaattttgagatggattctgatcagatggatgaattttttgaagcg
attgccgaaaatgacatcactttaatcaatgaaaaagatgcaaatgatactgatgataag
atcaatcttaatgatttatctgcgcctccaggtgttaaaattaacgatcctgttcgtatg
tatttaaaagaaattggacgcgttaatttattaagtgctgaagaagaaattgaacttgct
aaacgtattgagcagggggatgaagaagcgaaagcacgacttgcagaagcaaacttacgt
cttgttgtaagtattgcaaaacgttatgtaggacgtggtatgttattccttgatctaatt
caggaagggaacatgggtcttattaaagctgtagaaaagtttgattttacgaaaggattt
aaattctcaacttacgctacatggtggattcgtcaggcaatcacgcgtgcgattgctgac
caggcaagaacaattcgtataccagtgcatatggtagaaacgataaacaagttaatacgt
gtacaacgtcaattacttcaggacttaggacgtgatccttccccggaagaaattggagaa
gaaatggatttaccacctgaaaaagttcgtgaaatcttaaagatagcacaagagccagtt
tcacttgaaacaccgatcggtgaagaagatgacagtcacttaggtgattttattgaagat
caggacgcacaaagtccagctgatcatgctgcatatgagttattaaaagaacaattagaa
gatgtattagatacattaacagatcgtgaagaaaatgttttaagattacgatttggttta
gatgatggacgtacccgtacgcttgaagaagtaggaaaagtgttcggtgtaacgagagaa
cgtatacgtcaaattgaagcaaaagctttacgtaaattacgtcatccgtcaagaagtaaa
cgtcttaaagattttatggattaa
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