Macrococcoides bohemicum: HT586_10225
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Entry
HT586_10225 CDS
T07164
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mboe
Macrococcoides bohemicum
Pathway
mboe03420
Nucleotide excision repair
mboe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mboe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HT586_10225 (pcrA)
03430 Mismatch repair
HT586_10225 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mboe03400
]
HT586_10225 (pcrA)
Enzymes [BR:
mboe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HT586_10225 (pcrA)
DNA repair and recombination proteins [BR:
mboe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HT586_10225 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HT586_10225 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
DUF3641
Motif
Other DBs
NCBI-ProteinID:
QRN50546
LinkDB
All DBs
Position
complement(1947426..1949585)
Genome browser
AA seq
719 aa
AA seq
DB search
MNDLLKNMNEEQQNAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKDVSPYKILAITF
TNKAAKEMKDRVKNIIGDASDVIWISTFHSMCVRILRRDIDRIGIERNFTILDPTDQRSV
VKDILKKENIDPKKYDPRMFVGEISNLKNELKTPDDAQADANDFMSVMVAKVYKQYQEKL
LKNHALDFDDLIMMTLKLFERVPDVLDYYQNKFQYIHVDEYQDTNRAQYMLVKMLADKFK
NLCVVGDSDQSIYGWRGADIYNILSFEKDYKDAKTIFLERNYRSTKNILFAANEVIKNNT
ERKPKALWTDNDHGSKINYYKAQSERSEAEYIVSEILKKKRDGYALKDMAILYRTNAQSR
VLEETLMKSNVNYTMVGGTKFYDRKEIKDILSYLRLIANSNEDISFTRIINTPKRGIGPS
ALDKIVAYAENNGLSYFDALAEVDFIGLPKKTTEKLVQFYNMLDNIMKQQEFLSVSELAE
EVLEQTGYMRMLEAENTLESQSRIENIQEFMSVPKDYEKETPDEEQSLINFLTDLQLVAD
VDNADLEAGITLMTMHSAKGLEFKVVFIAGLEETIFPHSRSLNSDSEMEEERRLMYVAIT
RAEEHLYLTHADMRSLFGRTQANRKSRFINEIPDDILDTPARPTYPKGVKRGPARRMTTT
ATSAPSDYKVGDKVMHKAWGEGLVSNVSEKNGSTELDIIFKSVGMKRLLSQFAPIEKKE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatttattaaagaacatgaatgaagagcaacagaatgcagtgaagacgacagaa
ggaccactgcttatcatggcaggagcaggttcaggaaagacacgtgttctaacacaccgc
attgcttatttaatcgatgaaaaagatgtatctccatataaaatattagcaataacattc
acaaataaagcagcaaaagaaatgaaagatcgtgtaaaaaatattatcggcgatgcatca
gacgtaatatggatttctacgtttcacagtatgtgtgtaagaattttaagacgtgatatc
gatagaataggcatcgaacgcaactttacgatacttgacccgactgatcagcgttctgtc
gtaaaagatatactgaaaaaagagaatattgatccgaagaaatatgatccaagaatgttt
gtcggtgaaatttctaatttaaaaaatgaactgaaaacacctgatgatgcacaagcagat
gcaaatgattttatgagtgtgatggttgcaaaagtgtataaacaatatcaggagaaatta
cttaaaaaccatgcgctcgactttgatgatttaattatgatgacattaaagttatttgaa
cgtgtacctgatgtattagattattaccagaataaatttcagtatattcacgtcgatgaa
tatcaagatacgaatagggcgcaatatatgcttgttaagatgctcgctgacaagttcaaa
aatttatgtgtcgtaggggattcagatcaatctatctatggttggcgtggtgcagatatt
tataatatcttaagttttgaaaaagattataaagatgcgaagacgatatttttagaaaga
aactatcgttcaacgaagaatatattatttgctgccaatgaagtcattaaaaataataca
gaacgtaagccgaaagcattatggacagataatgatcacggctctaaaattaattattat
aaagcacaatcagaacgttctgaagcagaatatattgtatcggaaatattgaagaaaaag
cgtgatggttatgccttgaaagacatggcaattctatatcgtacgaatgcacaatcacgt
gtactggaagaaactttgatgaaatcaaatgttaactatacgatggtcggtggaacaaaa
ttctatgatagaaaagaaattaaagatatattaagctatttgagattaatcgcaaatagt
aatgaagatattagtttcacgcgtattattaatacgcctaaacgaggcattggaccatct
gcgttagataaaatcgtagcgtatgctgagaacaatggtttaagttattttgatgcgtta
gctgaagtagactttatcggtttaccgaaaaagacgactgaaaagcttgtccagttctat
aacatgttagataacattatgaaacagcaggaatttttgtctgtttctgaacttgcagaa
gaagtacttgaacaaacaggatatatgcgcatgttagaagcggaaaatacactagaatct
cagtcacgtattgaaaatattcaggagtttatgagtgtaccgaaagattatgaaaaggaa
acacccgacgaagaacagtcactgattaatttccttacggacctacaacttgttgcagat
gttgataacgcagatttagaagcaggaattacattgatgacaatgcactcagcaaaaggt
ttagagtttaaagtggtatttattgcaggacttgaagaaacgatctttccacattcaaga
agtttgaatagtgacagtgagatggaagaagaacgtagattgatgtacgttgcaattaca
cgtgctgaagagcatctctatttaacacatgcagatatgcgcagtttgttcggaagaact
caagcaaatagaaagtcacgatttattaatgaaattcctgatgatattttagatacacca
gctagaccaacgtaccctaaaggtgtgaaacgaggacctgcaagacgaatgacgactaca
gcaacctcagcaccgagtgactataaagttggcgataaagttatgcataaagcctgggga
gaaggtttagtaagtaacgttagtgaaaagaatggttcaacagaacttgatattatattt
aaatcagttggtatgaaacgtctattaagtcagtttgcaccgattgaaaaaaaggagtaa
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