Moraxella bovis: DQF64_04205
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Entry
DQF64_04205 CDS
T05535
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mboi
Moraxella bovis
Brite
KEGG Orthology (KO) [BR:
mboi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mboi03016
]
DQF64_04205
Enzymes [BR:
mboi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
DQF64_04205
Transfer RNA biogenesis [BR:
mboi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
DQF64_04205
Prokaryotic type
tRNA splicing ligases
DQF64_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AWY19777
UniProt:
A0AAQ2T1R9
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All DBs
Position
802421..803635
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AA seq
404 aa
AA seq
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MSIGLILNENGNNGVPVKIFTKDVEQKALNQLYAMSQLQFIHSHIAVMPDVHAGKGATVG
SVIPTKSAIIPSAVGVDIGCGMNALRLSIKAEQLPDNLKPARLAIEKHVPVGFEKHKQIM
AKMSTLDPLAIRLKKITDKHKGLLKMMSNFDKTWAKQLGTLGGGNHFIELCVDENDDVWI
MLHSGSRGIGSCIGEHFISLAKKMNETCFGYIPDRELSYLAQGTPFFDDYIEAVGWAQDY
ATENRKEMMRLIIKALQSKDAQFPRFTITKEAINCHHNYVSRETHFGSSVYVTRKGAISA
YEGELGIIPGSMGAKSYIVRGRGNSESFCSCSHGAGRKMSRGRAVREFGLADLVAQTDGI
ECRKDKGVLDEIPQAYKDIDEVMANQTDLVEVVHTLKQVMCIKG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcggacttattttaaatgaaaatggcaacaatggcgtgcctgtcaaaatcttt
accaaagacgtggagcaaaaggcgttaaatcagctctacgcaatgagccagctacaattt
atccatagccatatcgccgtcatgcctgacgttcatgcgggcaagggggcgactgtgggg
agcgtgattccgaccaaatcggcaatcattccgtctgcggtgggcgtggatattggctgt
ggcatgaacgccctacgcctgtctatcaaggcggagcagttgcccgacaacctaaaacct
gcccgccttgccattgaaaaacacgtccctgtcggctttgaaaagcacaagcaaatcatg
gcaaaaatgagtacgcttgacccgcttgccattcgtctcaaaaaaattaccgataagcac
aagggcttattgaaaatgatgagtaactttgacaaaacgtgggcaaaacagcttggcacg
ttgggcggtggcaatcactttattgagctgtgcgtggacgagaatgatgacgtgtggatt
atgcttcactctggttctcgtgggattggctcgtgcattggcgagcattttatcagtctt
gccaaaaagatgaatgagacgtgttttggttatattcctgaccgtgagctgtcgtatttg
gcacagggtacgccgttttttgacgattatattgaggcggtgggctgggctcaggactat
gcgaccgaaaaccgcaaggagatgatgagactcattatcaaagccttacaaagcaaagac
gcacaatttccccgctttaccataaccaaagaggcgataaactgtcatcacaactatgtc
agccgtgagacgcattttggcagttcggtctatgtaactcgcaagggggcgattagtgcc
tatgagggcgagcttggcattatccccggctctatgggggcaaaatcctatatcgtgcgt
gggcgtggcaatagcgagagtttttgttcgtgttcgcacggggcagggcgaaaaatgagc
agggggcgtgcggtgcgtgagtttggcttggcggatttggttgctcagacggacggtatc
gaatgtcgtaaagataagggcgtgctggacgagattccacaggcgtataaagatattgat
gaggtcatggcaaaccaaaccgatttggtggaggtggtgcacaccttaaaacaggtgatg
tgtattaaagggtga
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