Moraxella bovis: DQF64_06370
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Entry
DQF64_06370 CDS
T05535
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mboi
Moraxella bovis
Brite
KEGG Orthology (KO) [BR:
mboi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboi03019
]
DQF64_06370 (hrpA)
Enzymes [BR:
mboi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DQF64_06370 (hrpA)
Messenger RNA biogenesis [BR:
mboi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DQF64_06370 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
nSTAND3
AAA_30
NACHT
PhoH
Myosin_head
FtsK_SpoIIIE
DUF4303
Motif
Other DBs
NCBI-ProteinID:
AWY21677
UniProt:
A0AAQ2T0R7
LinkDB
All DBs
Position
1194719..1198927
Genome browser
AA seq
1402 aa
AA seq
DB search
MPNATQNPNTLLLAKDRHIAHRLERELRGNFPADIKAKKQAQLDSIIERSSQAVQARMDS
VPSDLKDKLNADLPVTARADEIIRAIQNNQVIIVAGETGSGKTTQLPKLVMLAGRGITGQ
IGHTQPRRLAARSVAMRIADELGESLGQTVSFKVRFTEQGSRDSLIKLMTDGILLAELGS
DKFLTRYDTIIIDEAHERSLNIDFILGYLKRLLPKRPDLKVIITSATLDTARFAEYFKAS
VKGDVPIINVEGRSYPVETRYRPLIDEIVKSHDDDAFDDMEDKLPRALTSAVAECFDDAR
TEGHPSSSDILIFASTEAEIREIQDILTAHAPPHTEILPLFARQSFAEQQCIFKPTGGRR
IIISTNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRAGRCGRI
GDGVCIRLYSKEDFDSRPPFTEPEILRTNLASVILQMEHLGLGDVAEFDFITPPDLRLVN
DGRKLLHELGALSDTPTKTAFKKVLKGKTSKQKHSALTDIGKKMARMPIDPCLARMLIAG
HEFACLDKMLIIVSALAVQDVRERPADKQSQADQKHALFRRENSDFLFYVELFNVLFSAH
EMHGGDKLTGNGRKNFAKKHYLSFPRIKEWQKTHEQLSQMVADLGYQIADNDNKIDDNNT
KKADDKKDAPKGRIGLKGGKKAKVGNSAILASLKEQGKTKLQFSEDYTSIHRALLTALLS
FVAHKTDTVGEYLMTKNQKARIFPASTLHKKGAEWVLAFEVVETSQVYMRTLSKIEPEWI
LSAGKNLLKYHYFEPHWSKKAGRVQAYAQISLFGLIIVHKQLVNYETIDLTASREIFIRD
ALVGDVQDSQADERYPKALPFLTHNRQKIKDVGDTEDKLRRRDLLVDEERLYEFYDDKIP
PYIASAKAFEDWLGKVGDDEFLKFKDEDVVNSVVNVGQEFPKFWQVGAVKFPLSYVFDPS
SDDDGVSVKVGAGALSQLDGVDLLWGVAGWRFELVSGLLKTLPKDIRRKIVPIPDTAHAL
MDKLTQGNGVGLLDQLCHNLLRMGVKVGADDFKIHEIDKYLQPLICVLDDKGRVIEKGRD
LEKLQAKYRTHAQVQTVSEGIHDSFPEHFDFIKTRHHKGMVTQAFFALSPDETGKVAVME
FGDLTGALAMHKKGVLSLVRLTLGAKQKQLTSQIDKVFKMAFAPLGDLEKLKSVLVDATL
QATFEKYAKPFVDTSVRKKVAGFVRDDKMGDLLDKVPLNAGEFGAVRELISGQFLSVGQE
MLKVLKDIYTTWQTVRGQLLMLDRDIFGESIDDIEDQLDDLCLGDFVYRVPYEAWRQYPR
YLGALKVRLDRLPNNLDNDLDGVYALDEHMERLANRIHDPKISEYRWLVEEYRIQLFSQP
MKTAVPVSAKRLDKVWASVMTR
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgcaacccaaaatcccaacactcttctactcgccaaagaccgccacatcgct
catcgcttagagcgtgagttgcgtggcaattttcctgccgacatcaaggccaaaaaacaa
gcccagcttgatagtatcattgagcgttctagtcaggcggtacaagctcgtatggacagc
gtgccgtctgatttaaaggataagctcaatgccgatttgcccgttaccgcccgagccgat
gagattatccgtgcgatacagaacaatcaagtcatcatcgtggcaggcgagacaggctcg
ggtaaaaccactcagctccccaaacttgtcatgctcgcaggacggggcatcacagggcaa
atcggacacactcagcccagacggcttgccgctcgcagtgttgccatgcgaattgcagac
gagcttggcgagagtttggggcagacggtgagttttaaggtgcgatttaccgagcagggc
agtcgtgatagccttatcaaactcatgacggacggtattttgcttgccgagctggggtcg
gacaagtttttgacacgctatgacaccattatcattgacgaagcgcacgagcgtagctta
aatattgactttattttgggttatttaaaacgcctactgccaaaacgccctgatttaaag
gtcatcatcacgtcagccaccctagacaccgcccgttttgccgagtattttaaggcgtcc
gtaaaaggcgatgtgccgattatcaacgtagaagggcgaagctatcctgtggagacccgc
tatcgccccttgatagatgagattgtcaaaagccatgacgatgacgcttttgatgacatg
gaagacaagctccccagagccttgacgtctgccgttgccgagtgttttgatgacgcacgc
accgaaggacacccaagctcatcggacattttgatttttgccagtaccgaagccgagatt
cgtgagatacaggacattttaaccgctcacgcaccgccccacaccgagattttgcccttg
tttgcccgccaaagttttgccgaacaacagtgtatttttaagcccacagggggtaggcgg
attatcatttcaaccaacgttgccgagaccgccttgaccgtgccaaacatccgctatgtc
attgatttgggttttgcacggattagccgttataattaccgctcacgcattcagcgtttg
cccattgaagccattagccaagcggcggcgaaccagcgagcgggacgttgtggacggatt
ggggacggtgtgtgcatacgtttgtactctaaagaagattttgacagccgtccgcctttt
accgagcctgagattttgcgtaccaatttggcaagcgtgattttgcaaatggagcatttg
gggctgggcgatgtggcggagtttgattttatcacaccgcctgatttacgccttgtcaat
gacggacgaaaactcctacacgagcttggggcgctatccgacacgccaaccaaaaccgcc
tttaaaaaagtcctaaaaggaaaaacgagcaaacaaaaacactccgctttgaccgacatt
ggcaaaaaaatggctcgtatgccgatagacccatgccttgcccgtatgctcatcgcaggg
catgaatttgcctgccttgacaaaatgctcatcatcgtctccgcccttgccgtgcaagac
gtgcgtgaacgccctgccgataaacagtcgcaagctgaccaaaagcacgccctgtttcgc
cgtgaaaattcggactttttgttttatgtagaattgtttaacgtactgtttagcgcccat
gaaatgcacggtggcgataagctgactggcaacggacgcaagaattttgccaaaaagcat
tatttgtcatttccacgcatcaaagaatggcaaaaaacgcatgaacagcttagtcaaatg
gtggcggatttgggttatcagattgccgataatgacaataaaattgacgataataatacc
aaaaaagctgatgataaaaaagatgccccaaaaggtcgcattggcttaaaaggcggtaaa
aaagctaaggtaggaaacagtgcgattttagccagtttaaaagaacaaggcaaaaccaaa
ctgcaatttagcgaagattataccagcattcatcgggcgttattgacggcactgctatct
tttgttgctcacaaaaccgacacggtgggcgagtatctcatgaccaaaaaccaaaaggca
cgtatttttcctgccagcaccttgcataaaaaaggagcagaatgggtgctcgcctttgaa
gtggtggaaacttcacaagtgtatatgcgtacactttccaagattgaacctgagtggatt
ttgtcggcaggcaaaaatcttttaaaataccattattttgagccacattggtcaaaaaaa
gccggaagagtgcaagcctatgctcagattagcctgtttgggctgattattgttcataaa
caattggtcaattatgaaaccattgacctgaccgcaagccgtgagatatttatccgtgat
gctttggtgggggacgtacaggacagccaagcggacgagcgataccctaaagccctgccg
tttttgacccacaaccgccaaaaaatcaaagacgtgggcgacaccgaagacaagctaaga
cggcgagatttactcgtggacgaagagcgactttatgaattttatgatgataaaattccg
ccctacattgcgtccgccaaagcctttgaagattggcttggcaaggtaggcgatgatgag
tttttaaaatttaaagacgaagatgtcgtaaacagtgtcgtcaatgtcggacaagaattt
cccaaattttggcaagtgggggcagtcaaattccccttgtcctatgtctttgacccaagc
tcggacgatgacggcgtaagcgtcaaagtgggggcaggggcattgtctcagcttgatggt
gtggatttattgtggggtgtggcagggtggcggtttgagcttgtgtcagggctattaaaa
accttgccaaaagacattcgccgaaaaatcgtccccattcctgacaccgcccacgccctg
atggacaaacttacgcagggcaatggcgtgggacttttagaccaactttgtcataatctg
cttagaatgggcgtaaaagtgggggcggacgattttaagattcatgagattgataaatat
ttacagcccttgatttgcgtgcttgatgacaaggggcgagtgattgaaaaagggcgagat
ttggaaaaattgcaagccaagtaccgcacgcacgcccaagtacagaccgtgtccgaaggc
attcacgacagcttccctgagcattttgactttatcaaaactcgtcatcataagggcatg
gtaacacaagccttttttgccctaagtcctgatgagacgggcaaagtagcggtgatggaa
tttggcgacttgacaggggcattagccatgcataaaaaaggcgtgttgtcgcttgtcagg
ctgacactcggagcaaaacaaaaacagctgacttctcaaattgataaagtctttaaaatg
gcgttcgctcctttgggtgatttggaaaaattaaaaagcgtgctggtggatgcgactttg
caagcgacttttgaaaaatacgccaagccctttgttgatacgagcgtgcgtaaaaaggtg
gcgggctttgtgcgtgatgataagatgggcgatttgcttgacaaagtgcccctaaatgca
ggcgagtttggggcggttagggagttgataagcggtcagtttttgagcgtgggacaagag
atgttaaaggtcttaaaggacatttacaccacttggcaaacggtgcggggacagcttttg
atgcttgaccgtgatatttttggcgagagcattgatgacattgaagaccagcttgatgat
ttgtgtttgggcgattttgtttatcgtgtgccttatgaggcttggcgacagtatccccgt
tatttgggggcattaaaggtgcgtcttgaccgtttgccgaacaatctggacaatgatttg
gacggggtgtatgcccttgatgagcatatggaaaggctggcaaaccgcattcacgaccca
aaaatcagcgagtatcgctggcttgtggaagaataccgcatacaactgttttcccaaccc
atgaaaacggcggtgcctgtctcggcaaaacgactcgacaaggtgtgggcgagtgtgatg
actaggtag
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