Moraxella bovis: DQF64_10875
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Entry
DQF64_10875 CDS
T05535
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mboi
Moraxella bovis
Pathway
mboi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mboi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DQF64_10875 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mboi03021
]
DQF64_10875 (rpoC)
03400 DNA repair and recombination proteins [BR:
mboi03400
]
DQF64_10875 (rpoC)
Enzymes [BR:
mboi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DQF64_10875 (rpoC)
Transcription machinery [BR:
mboi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DQF64_10875 (rpoC)
DNA repair and recombination proteins [BR:
mboi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DQF64_10875 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AWY20936
UniProt:
A0AAQ2Q1R8
LinkDB
All DBs
Position
complement(2125321..2129550)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKDLLDIMKGPADGGVKEFDSIQISLASPDTIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGIICEKCGVEVTAAKVRRDRMGHIELASPVAHIWFLK
SLPSRIGLLLDITLRDIERVLYFESYIVTDPGMTGLEKYQLLDDEQYFNALEQYGDEFIA
KMGAEAVQDLLKDIDVDGEIDELRATIPQTGSETKLKKMSKRLQLLEAFRDSGNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYAKLLQNNIAQTIKAAKKMVEREEPVVWDMLASVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNILSPANGEPIIVPSQDVVLGLYYISRSHVNAKGENMAFSTVNEALRAIG
SDDLSVNAKIKVRVTETILDERTGEKTTKTEIKDTVAGRLLIWNIMPEGMAFEECNKEMT
KKNISKLLNSCYRKLGVKESVLFADHLMYLGFAQATLSGISIGMEDMVIPPNKKEIVDTA
DAEVREIEQQFEGGFVTAGERYNKVVDIWSRTSDKIANAMMDNLSTDEVVNSQGEIEKEK
SFNSIYMMADSGARGSATQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTH
GARKGLADTALKTANSGYLTRRLVDVAQDLVITHDDCGTDAGQLMTPVIDGGEIVERLGD
RVLGRVTAKDVINHDGEVVIPTGTLIDERLVEVLDNNAIDEVYVRSVITCEAMQGVCAKC
YGRDLARGHLVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAASVDNSVSVGNNGTV
RFHNMKTVEHTDGHLVVVSRSAEIGVADAQGRERERYKVPYGSNILVRDGAEVGAGDVIA
KWDSHTHPIITEFAGTARFSDIADGMTATVKVDETTGMSSFEILASKDRPSLSKDLRPAI
ILDTTDGREVVYFLPAETVIRVSEGETVTAGSVLGRVPQATSGTKDITGGLPRVADLFEA
RKPKDHAIMAEVSGTVSFGKETKGKNRFVITDEEGNEHEELIPKWRQINVFEGEHVERGE
IVSDGPQNPHDILRLKGETALANYVVNEVQEVYRLQGVKINDKHIEVIVRQMLRKVEVID
GGDSSYFKGDQVEYTKVRALNEELIANDKFPIVYERQLLGITKASLATESFISAASFQET
TRVLTAAATMGKVDDLSGLKENVVVGRLIPAGTGLAYHQNRQRLAERGLEPVITVTEDPY
TKPADPLLAGTDVKDDFAAAFASEFGQSE
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattagacatcatgaaaggccctgctgatggcggggtaaaagagtttgac
agcattcaaatttctttggcaagccctgacaccatcaaatcatggtcgcacggcgaagtc
aaaaaacccgaaaccattaactaccgaacctttaagcctgagcgtgacggtctgttttgt
gccaaaatctttgggcctgtcaaggattttgagtgtttgtgtggcaaatacaagcgtcgc
aaatttcaaggtatcatttgtgaaaaatgtggcgtagaagtgactgccgccaaagttcgt
cgtgaccgcatgggtcatatcgagcttgcgtcgcctgttgcccacatttggttcttaaaa
tccttgccaagccgtatcggtctattgcttgatattaccttgcgtgatatcgagcgtgtg
ctgtattttgaaagctatattgtcaccgaccctggtatgacaggtcttgaaaaataccaa
ctgctggatgatgagcaatattttaatgccttagaacaatacggcgatgagtttattgcc
aagatgggtgcagaagccgttcaagacttgctaaaagatattgatgtcgatggcgagatt
gatgagctgcgtgcgaccattccccaaacaggctctgagactaaactcaaaaagatgtca
aaacgcttgcaactgttagaggcgttccgtgattcgggtaacaaacctgaatggatggtg
atgacagttttgcctgtattgccacctgatttgcgtccattggtaccacttgaaggcggt
cgttttgccacgtctgatttgaacgatttgtatcgccgtgtcatcaaccgtaataaccgc
ctaaaacgcctgttggagctaaatgcccccgacatcatcgtgcgtaacgagaagcgtatg
cttcaagaagcggtcgatgccttgcttgataacggtcgtcgtggacgtgccatcacaggt
tcaaacaagcgtccattaaaatcgcttgcagacatgattaaaggtaagcaaggtcgtttc
cgtcaaaaccttttgggtaagcgtgtggactattcaggtcgttcggtgattgtggtaggt
ccaaccctacgtctgcaccaatgcggtctgcctaagaaaatggcattggagctatttaag
ccgtttacttacgccaaattattgcaaaacaacattgcccagaccatcaaagctgccaaa
aaaatggtagagcgtgaagagcctgtggtgtgggatatgctcgccagcgtcattcgtgaa
caccctgtgctactgaaccgtgccccaacacttcaccgtctaggcttgcaagcctttgag
cctgtgcttattgagggtaaagccattcagctccacccactcgtatgtgcggcatttaac
gctgactttgacggtgaccaaatggcggtacacgtgccattgaccctagaagctcagctt
gaagctcgtgccttgatgatgtctaccaataacatcctatcgcctgccaacggcgagccg
attattgtgccatcacaagacgtggtgctcggtctgtactacatcagccgtagccatgtc
aatgccaaaggcgaaaatatggcgtttagtactgtcaatgaagccttgcgtgccatcggt
tctgatgacttatctgtcaatgccaaaatcaaagtgcgtgttactgagacgattttggat
gaaagaactggcgagaaaaccaccaagactgaaatcaaagacacggttgcagggcgtttg
ctgatttggaacatcatgccagagggcatggcatttgaagaatgcaacaaagagatgacc
aagaaaaacatctctaaactgctaaactcatgctatcgcaaactgggtgttaaagaatct
gttctgtttgctgaccatttgatgtatctaggctttgcccaagcgaccttgtcaggtatc
tcaatcggcatggaagacatggtgattccgccgaacaagaaagagattgttgatactgcg
gacgctgaggtgcgtgagattgaacagcagtttgagggtggttttgttaccgcaggtgaa
cgctataacaaggtggttgatatttggtctcgtacgtctgataaaatcgccaatgcgatg
atggataacttatcgactgatgaagtggtgaacagtcaaggtgagattgagaaagaaaaa
tcctttaactccatctacatgatggcagattcgggggctcgtggtagtgccacgcagatt
cgtcagcttgctggtatgcgtggcttgatggcaaaaccagacggttctatcattgagaca
ccgattaaagcgaacttccgtgaaggcttgacggtattgcagtactttatctcaacgcac
ggtgcccgtaaaggtcttgctgataccgccctaaaaactgctaattcgggttatctgacc
cgtcgtttggtagacgtagcacaggacttggtgattacgcatgatgactgtggcaccgat
gcaggacagctcatgacccccgtgattgatggtggtgagattgttgagcgtttgggtgac
cgtgtattgggtcgtgtgaccgccaaagatgtcatcaatcacgatggcgaggtagttatc
cccacaggtacgctgattgatgaacgtctggttgaagtgctggacaataacgccattgac
gaggtgtatgtacgttcagttatcacctgtgaagcaatgcaaggcgtatgtgctaagtgt
tatggtcgtgatttggctcgtggtcatcttgtaaatatcggcgagtcagttggtgttatg
gcagcccagtccattggtgaaccaggcacacagctaaccatgcgtacgttccacgtgggt
ggtgcggcaagtgcagcatcagtagacaacagcgtatcagtgggcaataacggtacagtg
cgttttcataacatgaaaaccgtagaacacactgatggtcatttggtggttgtctctcgt
tcggcagagattggtgtggcagatgcccaaggtcgtgagcgtgagcgttataaagtgcct
tatggttctaacatcttggtgcgtgacggtgccgaagtgggtgcaggtgatgttattgcc
aaatgggattcgcatacccatccaatcatcaccgagttcgctggtacagcacgatttagc
gacatcgccgatggcatgaccgcaacggttaaggtggatgaaaccacaggcatgagctcc
tttgagattttggcaagcaaagaccgtccaagtctctccaaagacttacgtcctgccatc
atcctagatacgacagacgggcgtgaagtggtgtacttcctacctgctgagaccgtgatt
cgtgtgtcagagggcgagacggtaaccgcaggttcggtgctaggtcgtgtgccacaagcc
acatcaggtaccaaggacattaccggtggtctgccacgagtggctgatttgttcgaagct
cgtaaaccaaaagaccacgccattatggcagaggtgagtggtacggtgtcatttggtaaa
gaaaccaaaggtaaaaaccgctttgtcatcaccgatgaagagggtaacgaacacgaagaa
ctcattccaaaatggcgtcaaatcaacgtctttgagggcgagcatgtcgagcgtggtgag
attgtctctgatggtccacaaaatccacatgacatcttacgcttaaaaggcgagacggca
ttggcgaattacgtggttaatgaagtccaagaggtttaccgcttacaaggtgtgaagatt
aacgataagcacatcgaggttatcgttcgtcaaatgctccgtaaagtagaagtgattgat
ggcggtgattctagctatttcaaaggcgaccaagtggaatacaccaaagtgcgtgcctta
aacgaagagcttatcgctaatgacaaattcccaatcgtctatgagcgtcagctactgggt
atcaccaaagcatcgcttgccaccgagtcgtttatctcagcagcgtcattccaagagacc
acacgtgtcttgacggcggcggcaacgatgggtaaagtggatgatttgtctggtctcaaa
gagaacgtggtggttggtcgcttgattcctgctggtactggtttggcgtatcatcaaaac
cgtcaacgccttgctgagcgtggtttggagccagtcattaccgtaaccgaagacccgtac
accaagcctgctgacccactactggctggaacagatgtcaaagatgactttgcagcggca
tttgccagtgaatttggtcaaagtgaataa
DBGET
integrated database retrieval system
