Moraxella bovis: DQF64_13255
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Entry
DQF64_13255 CDS
T05535
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mboi
Moraxella bovis
Pathway
mboi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mboi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DQF64_13255 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mboi03019
]
DQF64_13255 (rnr)
03016 Transfer RNA biogenesis [BR:
mboi03016
]
DQF64_13255 (rnr)
Enzymes [BR:
mboi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DQF64_13255 (rnr)
Messenger RNA biogenesis [BR:
mboi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DQF64_13255 (rnr)
Transfer RNA biogenesis [BR:
mboi03016
]
Prokaryotic type
tRNA degradation factors
DQF64_13255 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
CSD
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AWY21367
UniProt:
A0AAX3EU15
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All DBs
Position
2618162..2620402
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AA seq
746 aa
AA seq
DB search
MKKTPTWNDPNATDEANKYQNPIPSRLLILQTVAQMNNDGKPATMESLGLHFEILGDEER
FFALTNRLKAMLRDNQLERTDGIHFSIAPLPTTVTGKVSANAKGFGFVVLDDMPDLFIHE
KQMRVVFDGDTVEAVATEFRGKPEACIQNVLHRASTEFVGVIDSDDEGYFVRLSGANAHQ
PITLTDDDVAHHGASVGDSVKVTIIDMPTYQEYATGKISELLTNLNDRELIIETTLLNHA
IPSEFSKATIEQADSYGEPTAKDMKGRVDLRDLPLITIDGEDARDFDDAVYACKRAGGNY
RVVVAIADVSHYVRPQSPLDMDAYERGTSVYFPHRVIPMLPEMLSNGLCSLNPKVDRLCM
VADIKLSRVGKVTGYEFYPAVMHSQARLTYNQVNAYFDDPTNETLPDDLVKNPDVCKSVD
TLFALYQILDKKREERGAMAFETAESYIVFGEDGDIKDIKKRTRGDAHKLIEEMMLLANT
CGANFALKHDLPALYRNHDKPSDEKSGKLAEYLKSFGLAFPTESPTHADYQRVIKATEGR
ADTESIHAMLIRSMMQANYSPDNIGHFGLAYDEYSHFTSPIRRYSDLMLHRAIKDKVTNT
KPKPAIYKTLDDAGEQTSTTERRAEEASRHVETWLKCHYMQRHLGDEFVGTITTVTSFGL
FVTLNDLFIDGLIHISNLSAEYYEYNEREQALIGEKGSIFKLGEQLLIKVAGVNMDLLQV
DFALVEKVGDEKVVKSAKKKASRKKS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaccaacgtggaacgaccccaacgccaccgatgaagccaataaataccaa
aatcccattccctcacgcctgcttatcctacaaactgtcgcccaaatgaacaatgacggc
aaacctgccacgatggagagtttgggactgcattttgagattttgggtgatgaggagcgg
ttttttgccctaaccaaccgcctaaaagccatgctaagagacaaccaactagaacgcacg
gacggcattcattttagcattgcccctctgccgaccaccgtaacgggcaaggtgtcggca
aatgccaagggctttggctttgtcgtgcttgacgatatgcctgacctatttatccacgaa
aagcaaatgcgagtggtctttgatggcgatacggtagaagcggtggcgaccgagtttcgt
ggcaagcccgaagcctgcatccaaaacgtgctacaccgtgccagcactgagtttgtgggc
gtgattgacagcgatgatgagggctactttgtgcgtctgtcaggggcgaatgctcatcag
cccattacgctgaccgatgatgacgtggctcatcatggggcgagcgtgggcgacagcgtg
aaagttactatcattgatatgccgacttatcaagagtacgccacaggcaagattagcgag
cttttgaccaatcttaatgaccgtgaacttatcattgaaacgaccctgctaaaccacgcc
ataccgtctgaatttagcaaagccaccatagagcaagccgacagctatggcgagccgact
gctaaggacatgaaaggacgtgtggatttaagggacttgccactcattaccattgatggc
gaggatgctagggactttgacgatgcagtgtatgcttgcaaacgagcaggcggtaattac
cgtgtcgtggttgccattgcggacgtgagccactatgtaagaccccaatctccgcttgat
atggacgcgtacgagcgtggtacgagcgtgtattttccccaccgtgtcatccccatgctc
ccagaaatgctgtccaacggcttatgctcgctaaaccccaaagtcgataggctgtgcatg
gtggcggatattaagctgtctcgtgtgggcaaggtaacaggctatgagttctaccctgcg
gtcatgcactcacaggctcgcctaacttacaaccaagtaaacgcctattttgacgacccg
actaatgagaccctacctgatgatttggtcaaaaatcctgatgtctgtaaatcggtggac
acgctttttgctctgtatcaaatccttgataaaaagcgtgaggaacgaggagcgatggca
tttgagacggcggagagttacatcgtctttggcgaagatggcgacatcaaggacatcaaa
aaacgcactcgtggcgatgctcataagctcatcgaagagatgatgctccttgccaatact
tgtggggcgaatttcgccctaaaacacgacttgcccgccctttatcgcaaccatgataaa
ccctctgatgaaaaaagcggtaaacttgccgaatatcttaaatcctttggtttggcattc
ccgaccgagtcgcccacccatgccgactatcaacgagtcatcaaggcaaccgaaggcagg
gcggacaccgagagtattcacgccatgctaattcgctccatgatgcaagcgaactatagc
cctgacaacatcggacattttggcttggcgtatgatgagtatagccactttaccagcccc
attcgccgttattctgacctcatgctccaccgagccattaaggataaagttacaaacacc
aagcccaagcctgccatttataaaaccctagacgatgcaggcgagcaaacttccaccacc
gaacgccgtgccgaagaagcaagccgtcatgtagaaacgtggctaaaatgccactatatg
caaaggcatttgggcgatgagtttgtggggacgattaccaccgtaacgagttttggtttg
tttgttacgctaaatgacttgttcattgacggactgattcacatctcaaacctatctgcc
gagtactatgagtacaacgagcgtgaacaagccttgattggcgagaaaggctcaatcttt
aaacttggcgaacagcttttgattaaggttgctggcgtgaatatggatttattgcaagtg
gattttgcgttggttgagaaagtgggggatgagaaggtggttaagagtgctaagaaaaag
gcgagcagaaagaaaagctga
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