Mycolicibacterium boenickei: MBOE_01100
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Entry
MBOE_01100 CDS
T07414
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mbok
Mycolicibacterium boenickei
Brite
KEGG Orthology (KO) [BR:
mbok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbok03016
]
MBOE_01100
Enzymes [BR:
mbok01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MBOE_01100
Transfer RNA biogenesis [BR:
mbok03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MBOE_01100
Prokaryotic type
tRNA splicing ligases
MBOE_01100
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Paralog
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GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BBX88461
UniProt:
A0AAX2ZUS0
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All DBs
Position
complement(125522..126730)
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AA seq
402 aa
AA seq
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MTAHQVADHKLVNFASHIDDNTIEQAKQTASMPFVHPHVALMPDAHSGKGSAVGTVIPTI
DAVIPAAVGVDIGCGMIAARTEFTATDLQGRDLAALRTAIEATIPLSPGNYNDSLARFPF
TQGRIADLEHLARDGGIDLAHSPKWREQLGSLGGGNHFIELCLDQADRVWLFLHSGSRGV
GNKIAQKHIKIAQKLMKRWWIDLPNPDLAYLPQGTQEFTEYLRDLNWAQRFAFENRAEMM
DRYMSVFADWMGYAEMSRLHTAGDFEVERINTHHNYTRKEHHGGRDVWLTRKGAIDAHTG
VMGLIPGSMGTRSYVVRGKGDPAGLCSAPHGAGRRFSRNEARRRFTADDLAQRMRGIEYR
HGAEWIDEIPDAYKDIDVVMADAASLIEIEHELRQVMNVKGT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaccaggtcgccgaccacaagctggtgaacttcgccagccacatcgacgac
aacaccatcgagcaggcgaagcagaccgcctcgatgccgttcgtgcatccccatgttgcg
ctgatgccagatgcccacagcggcaagggttccgccgtcggcacggtgatcccgacgatc
gacgcggtgatcccggcggcggtcggcgtcgacatcggctgcgggatgatcgctgcccgc
acggaattcaccgccaccgaccttcagggccgggacctggcggcgctgcggacggcgatc
gaggcgacgattccgctgtcgccgggcaactacaacgactcgctcgctcggttcccgttc
acgcagggccgcatcgccgatctcgagcatctggccagggatggcgggatcgaccttgcg
cactcgcccaagtggcgcgagcaactcggctccctcggtggcggcaaccacttcatcgag
ctctgcctggaccaggcggatcgggtgtggctgttcctgcattcgggctcccgtggggtg
ggaaacaagatcgcccagaagcacatcaagatcgcgcagaagctcatgaagcggtggtgg
atcgacctgcccaacccggacctggcctacctgccccagggcacccaggaattcaccgag
tatctgcgggacctcaactgggcacagcgattcgcgttcgagaaccgcgccgagatgatg
gaccgctacatgtcggtcttcgccgattggatgggctatgccgagatgagccggctgcac
accgcaggcgatttcgaggtcgagcgcatcaacacgcaccacaactacacccgcaaggaa
caccacggcggccgggatgtgtggttgacgcgtaagggtgcgatcgacgcgcacaccggc
gtcatggggctgatcccgggcagcatgggaactcggtcatatgtggtgcgcggcaagggc
gaccctgccgggttgtgctcagcgccgcacggcgccggccgccgcttctcccgcaacgag
gcgcgtcgtcggttcaccgccgatgacctcgcgcaacggatgcggggtatcgagtatcgg
cacggcgcggaatggatcgatgagattcccgacgcgtacaaggacatcgacgtggtgatg
gcggacgccgcgagtctcatcgagatcgagcatgagctgcgtcaggtcatgaacgtgaag
ggcacgtag
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