Mycolicibacterium boenickei: MBOE_06130
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Entry
MBOE_06130 CDS
T07414
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbok
Mycolicibacterium boenickei
Brite
KEGG Orthology (KO) [BR:
mbok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbok03032
]
MBOE_06130 (topA)
03400 DNA repair and recombination proteins [BR:
mbok03400
]
MBOE_06130 (topA)
Enzymes [BR:
mbok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MBOE_06130 (topA)
DNA replication proteins [BR:
mbok03032
]
Prokaryotic type
DNA Topoisomerases
MBOE_06130 (topA)
DNA repair and recombination proteins [BR:
mbok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MBOE_06130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBX88964
LinkDB
All DBs
Position
complement(674422..677199)
Genome browser
AA seq
925 aa
AA seq
DB search
MIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRNAADVPAKYKGEPWARLGVNVDDNFE
PLYIVSPDKKSTVTELKDLLKGVDELYLATDGDREGEAIAWHLLETLKPKVPVRRMVFHE
ITEPAIRAAAENPRDLDIALVDAQETRRILDRLYGYEVSPVLWKKVAPKLSAGRVQSVAT
RIIVQRERERMAFRSAGYWDVSAELDASVSDPQATPPRFTAKLNTVDGRRVAAGRDFDSL
GQLKKPDEVLVLDETSAGALAAGLRGAQLAVSSVEQKPYTRRPYAPFMTSTLQQEAARKL
RFSSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARNQAQQLYGAEYVHPSPRQYTR
KVKNAQEAHEAIRPAGDVFQTPGQLHAQLDTDEFRLYELIWQRTVASQMADARGTTLSLR
IAGTAAGGEQVVFNASGRTITFPGFLKAYVESIDELAGGESDDAESRLPNLTQGQRVDAA
DLTADGHQTSPPARYTEASLIKALEELGIGRPSTYSSIIKTIQDRGYVQKKGSALVPSWV
AFAVVGLLEQHFGRLVDYDFTAAMEDELDEIANGQEQRTNWLSNFYFGGEHGVEGSIARA
GGLKHLVGGNLEGIDAREVNSIKLFDDDEGRAVVVRVGRNGPYLERMIADPDNPGELKPQ
RANLKDELTPDELTLELAEKAFATPQEGRVLGVDPATGHEIVAKDGRFGPYVTEILPEPP
EDPDAGTTAKKGKKPTGPKPRTGSLLRTMDLETVTLDDALKLLSLPRVVGVDPSNNEEIT
AQNGRYGPYLKRGTDSRSLATEEQMFTITLDEALKIYAEPKRRGRQAAAAPPLRELGTDP
ASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDERASELLADRRARGPVKKAAKKA
PAKKAAAKKTAAKKAPAKKAAAKKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtggagtcgccgacaaaagcgcgcaagatagctggctacctgggctccaattac
gtggtcgaatcctcccgcgggcacattcgtgacctgccgcgcaacgccgctgacgtgccg
gccaaatataaaggtgagccgtgggcgcgcctcggagtcaacgtcgacgacaacttcgaa
ccgctctacatcgtcagcccggacaagaagagcaccgtcaccgaactcaaggacctgctc
aagggcgtcgacgagctctatctcgcgacggacggtgaccgcgagggtgaggccatcgcc
tggcacctgctggagaccctgaaacccaaggtgccggtccggcggatggtgttccacgag
atcaccgagcctgccatccgcgccgccgccgaaaacccgcgtgacctggatatcgcgctg
gtcgatgcgcaggaaacccgccgtatcctcgaccggctctacggctacgaagtgtcgccc
gtgctgtggaagaaggtcgcgccgaagctttcggcaggccgcgttcagtcggtggccacc
cgcatcatcgtgcagcgggagcgcgagcgcatggcgttccgcagcgccggttactgggac
gtcagcgccgagttggacgcgtcggtgtccgacccgcaggccaccccgccgcggttcacc
gccaaactcaacaccgtcgacggccgccgggtcgccgccggccgtgatttcgactcgctg
ggccagctgaagaagcccgacgaggtgctcgtgctcgacgagaccagcgcaggagccctg
gccgccgggctgcgcggtgcccagctggccgtcagctccgtcgagcagaagccgtacacc
cgccgcccctacgcgccgttcatgacgtcgacgctgcagcaggaagccgcccgcaagctg
cggttctcctccgagcgcaccatgagcatcgcgcagcggctgtacgagaacggctacatc
acctacatgcgtaccgactcgaccacgctgtcggagtcggccatcaatgccgcgcgcaac
caggcgcagcagctctacggcgccgagtacgtgcatccgtcaccgcggcagtacacccgc
aaggtcaagaacgcgcaggaagcgcacgaggccatccgccccgccggtgacgtgttccag
accccgggtcagctgcacgcccagctcgacaccgacgagttccggctctacgagctgatc
tggcagcgcaccgtcgcctcgcagatggccgacgcgcgcggtacgacgctgtcgctgcgg
atcgccggcaccgccgctggtggcgagcaggtcgtcttcaacgcgtccggtcgcaccatc
acgttcccgggcttcctcaaggcctacgtcgagagcatcgacgagctggccggcggcgaa
tccgacgacgccgagagccgtctgccgaacctgacgcaggggcagcgcgtcgacgccgcc
gatctgaccgccgacggccaccagaccagtccgccggcccgctacaccgaggcctcgctg
atcaaggccctcgaagagctggggatcggccgtccgtcgacgtacagctcgatcatcaag
accatccaggaccgcggctacgtgcagaagaagggcagcgcgctggtgccgtcctgggtc
gccttcgccgtggtcggcctgctggaacagcacttcgggcgtctggtggattacgacttc
accgcggccatggaagacgagctcgacgagatcgccaacggccaggagcagcgcaccaac
tggctgtcgaacttctacttcggcggtgagcacggcgtcgagggttcgattgcccgggcc
ggtgggctcaagcacctcgtgggcggcaacctcgaaggcatcgacgcgcgagaagtcaac
tccatcaagctctttgatgatgacgaaggccgcgccgtggtggtccgggtgggccgcaac
gggccgtacctggagcggatgatcgccgacccggacaatcccggtgagctcaagccgcag
cgcgccaacctcaaggacgagctgactcccgatgagctgaccctggagctggccgaaaag
gctttcgccacaccgcaagagggacgtgtgctgggcgtcgacccggcgaccggacacgaa
atcgttgccaaggacggacgattcggtccctacgtcaccgagatcctccccgaaccgcca
gaggaccccgatgcggggacgacggccaagaagggcaagaagccgacgggccccaagccg
cggaccggatcgctcttgcgcacaatggatctcgagacggtgacactcgacgacgcgctc
aagctgctgtcgttgccgcgcgtggtcggcgtcgacccgtcgaacaacgaggagatcacc
gcgcagaacggccgctacggcccatacctgaagcgcggcaccgactctcgctcgctggcc
accgaggaacagatgttcaccatcaccctcgacgaggcgctgaagatctacgccgagccg
aaacgccgtgggcgtcaggccgctgcggctccgccgctgcgtgagctgggcaccgacccg
gcatcgggcaagccgatggtgatcaaggacggccggttcggtccgtacgtcaccgatggt
gagacgaacgccagcctgcgcaagggcgacgacgtcgcctcgatcaccgatgagcgggcc
tcggaactgctggccgatcgtcgggcccgcgggccggtgaagaaggctgccaagaaggcg
cccgccaaaaaggccgcggccaagaaaaccgcggccaagaaagccccggcgaagaaagcc
gcggccaagaaggcctga
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