Mycolicibacterium boenickei: MBOE_55160
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Entry
MBOE_55160 CDS
T07414
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbok
Mycolicibacterium boenickei
Pathway
mbok03420
Nucleotide excision repair
mbok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MBOE_55160
03430 Mismatch repair
MBOE_55160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbok03400
]
MBOE_55160
Enzymes [BR:
mbok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MBOE_55160
DNA repair and recombination proteins [BR:
mbok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MBOE_55160
MMR (mismatch excision repair)
Other MMR factors
MBOE_55160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBX93867
LinkDB
All DBs
Position
complement(5736385..5739711)
Genome browser
AA seq
1108 aa
AA seq
DB search
MTHTAPPGVRYSPAELSSALGLFPPTEEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVW
LVANGYATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPVPGASDDAVESATVSTY
HAFAGTLLREHGLLLPVEPDTRLLSETELWQLAFEVVCAHPGELAIEKTPAAVTDMVLRL
SGALAEHLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLKMLATQTERTELVPLI
DALHQRMRTDKVMDFGMQMSAAARLASQFPQVGEQLRQRFRVVLLDEYQDTGHAQRVALS
SLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLADGTPAPTLELRTSWRN
PPSALHLANAVSEEARRRSVTVHELRPRPDAEPGTIRCALLNDVETERDWVADHLARIYH
GAVAQGADTPTAAVLVRRNADAAPMAEALSARGVPVEVVGVAGLLAVPEVADLVAMLRLV
ADPAAGSAVMRVLTGPRWRFGARDIAALWRRARELDDRAAGEPSPAEIVAQAAPDADAAC
LADAICDPGAAEHYSPAGYQRIEALGRELTVLRAHLSHPLPELVAEVRRVAGLDAEARAA
RPVAAGWTGTENLDTFCDLVADFAGRPGGSVLALLAYLDVAADVENGLAPAELTVSHDRV
QILTVHAAKGLEWQVVAVPHLSGRVFPSTASARTWLTDPSDLPPLLRGDRATESELGVPV
LDTSDINDRKILSDKISDHKRSLEQRRVDEERRLLYVAITRSEDTLLISGHHWGATESKP
RGPSEFLCEIKAIIEDAAAQGRPCGEIEQWAQDPPPGEVNPLRDKAVEAVWPAAPARVSD
VGRGAALVAQAQAHAQAGDDDQEGSGQGAAADAEGWAADVDALLAERDRAPQATPMELPG
QLSVSTLVELSRDRQAALQRLHRKLPQRPDPHALLGTAFHEWVQRYFHSERLFDLDDLPG
AVDGDSGRASAAELAELQDAFVMSSWAARTPIEVEVPFDMAIGRTRTTVVRGRIDAVFAQ
EDGTTTVVDWKTGEPPSTPEAMAQAAVQLAVYRLAWASLRGCPPESVRAAFHYVRSGQTV
SPESLPGEDELVALLTDPVTAPDLGEEF
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaccgcaccgcccggcgtgcggtacagcccggccgaattgtcctccgcactg
ggcctgttcccgccgaccgaggagcaggccgcggtgatcgccgcgccaccggggcccgtc
gtggtgatcgcaggcgccggtgcaggcaagaccgagaccatggcagcccgggtggtctgg
ttggtggccaacggctacgccacgccatcgcaggtgctggggctgaccttcacccgtaag
gcggcaggccagctgctgcgccgggtacgcacccggctggcccggctcgccggtgccggt
ctggcgccggtaccgggagcgagcgacgatgcggtggagtcggcgacggtcagcacctac
cacgcgttcgccggcacgctgctgcgcgagcacgggctgctgttgccggtcgagccggac
acccggttgctcagcgaaaccgagctgtggcagctggcattcgaggtggtgtgcgcccat
ccgggggaactggccatcgagaagacgccggccgccgtcaccgacatggtgctgcgcctg
tccggcgcgctcgccgagcacctggtggacaccgaccagctgcgcgacacccacgtggag
ctcgagcggctggtgcacaccctgcccgccgggccgtaccagcgggatcgcgggcccagc
cagtggctgctgaaaatgctggccactcagaccgaacgcaccgagctggtgccgttgatc
gatgcgctgcaccagcggatgcgtaccgacaaagtgatggatttcggtatgcagatgtcc
gcggcggcgcggctcgcgtcgcagttccctcaggtcggtgagcaactgcggcaacgtttc
cgggtggtgctgctcgacgagtaccaggacaccgggcacgcgcagcgggtggcgctgtcc
tcgttgttcggcggcggcgtcgacgatggcctggcgctgacggcggtgggggacccgatc
cagtcgatctacggctggcggggcgcgtcggcgacgaatctgccccggttcaccaccgac
ttcccgctcgccgacggtacgcccgcgccgaccctggagctgcggaccagctggcgcaac
ccgcccagcgccctgcatctggccaacgcggtatcagaggaggcacgccgacgctcggtg
acggtgcatgagctgcggccccggcccgatgccgagcccggcaccatccggtgcgcactg
ctcaatgacgtcgagaccgaacgtgactgggtggcagaccatctggcccggatctaccac
ggcgcggtggctcagggcgcggacacgcccaccgctgcggtactggtccggcgtaacgcc
gacgccgcgccgatggccgaggcgctgagtgcccgcggggtgcccgtcgaggtggtcgga
gtggccgggctgctggccgtgcccgaggtggccgatctggtcgcgatgctgcgcctggtc
gccgatcccgccgccgggtcggcggtgatgcgagtgctgaccgggccgcggtggcggttc
ggtgcccgcgacatcgccgcgttgtggaggcgcgccagggaactcgacgatcgagcggcg
ggggagcccagcccggccgagatcgtggcacaggccgcccccgacgccgacgcggcctgc
ctggcggatgcgatctgcgatcccggtgccgccgagcactattcgccggccggatatcag
cggatcgaggccctcgggcgcgagctgaccgtgttgcgtgcgcacctgagtcacccgctg
cccgagctggtggccgaggtgcggcgcgtcgccggattggatgccgaggcgcgtgccgcc
cggccggtggccgctggctggacggggaccgagaacctcgacacgttctgcgatctcgtg
gccgacttcgccgggcggccgggcggttcggtgctcgcgctcctggcttatctggacgtg
gcggccgacgtggagaacggcctggcgcctgccgagttgacggtgtcgcacgaccgggtg
cagatcctcacggtgcacgccgccaaggggctggaatggcaggtggtggcggttccgcat
ctgagcggccgggtgttcccgtcgacggcttcggcgcgcacctggctgacggatccgtcg
gatctgcctccgctgctgcgcggcgaccgcgcaaccgagtccgagctcggtgtcccggtg
ttggatacctccgacatcaacgaccggaagatcttgtcggacaagatctccgatcacaaa
cgcagcctcgagcagcgtcgtgtcgacgaggagcggcggctgctgtacgtcgcgatcacc
cggtcggaggacacgttgctcatctccgggcatcactggggtgctaccgagagcaagccg
cgtggcccgtcggagttcctctgcgagatcaaggccatcatcgaggacgccgccgcgcag
ggccggccatgcggggagatcgagcagtgggctcaggacccgccgcccggtgaagtgaac
ccgttgcgggacaaggctgtcgaagccgtctggccggcggctccggcccgagtttctgat
gtcggccgaggcgcggcactggtggcccaggctcaggcccacgcgcaggcgggcgacgac
gaccaggagggcagcgggcaaggcgctgctgccgacgccgagggctgggctgccgacgtc
gacgcattactggccgaacgtgatcgcgcaccacaggccaccccgatggagctgcccggt
cagttgtcggtcagcacactggtggagctcagccgtgatcggcaggccgcgttgcagcgg
ctgcatcgcaagctgccgcagcggccggatccgcatgccttgttgggcaccgcattccac
gagtgggtgcagcggtacttccactccgagcggttgttcgacctcgatgatctgcccggc
gcggtggacggcgacagtggtcgtgccagtgcggccgaactggccgagttgcaggacgcc
ttcgtcatgtcgtcgtgggccgcgcgcaccccgatcgaggtggaagttccgttcgacatg
gcgatcgggcggacccggacgaccgtcgtgcggggccggatcgatgcggtgttcgcacag
gaggacggcaccaccacggtggtggactggaagaccggcgagcccccgtccaccccggaa
gccatggcgcaggccgcggttcagctcgcggtgtaccgcctggcctgggcgtcactgcgt
gggtgcccgccggagtcggtgcgggccgcgttccattacgtgcgttcggggcagaccgtg
agccccgaatcgctgcccggcgaggatgaactcgtcgccctgctcaccgaccccgtgacc
gccccggatctcggggaggagttctag
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