Mycolicibacterium boenickei: MBOE_56340
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Entry
MBOE_56340 CDS
T07414
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mbok
Mycolicibacterium boenickei
Brite
KEGG Orthology (KO) [BR:
mbok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbok03021
]
MBOE_56340
Transcription machinery [BR:
mbok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MBOE_56340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
HTH_23
HTH_3
HTH_24
MarR_2
HTH_20
Sigma70_ECF
KORA
HTH_IclR
DUF7343
LacI
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX93985
LinkDB
All DBs
Position
complement(5858136..5858888)
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AA seq
250 aa
AA seq
DB search
MTSEYADVREMFRELSGLSEDSSARERQRERIVERCLPLADHIARRFDGRGEPREDLVQV
ARVGLVNAINRFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAAT
AELSQRLGRAPTASELAEELDMDREEVIEGLVAGSSYNTLSIDSGGGGDEDAPAIVDTLG
DLDAGLDRIDNRETLRPLLAQLPERERTVLILRFFESMTQTQIAERVGVSQMHVSRLLAK
SLARLRDQLQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcggaatatgcggacgttcgcgagatgtttcgcgaactcagcggactgtccgaa
gactcgtcggctcgcgaacgtcaacgcgagcggatcgtcgagcgctgcctgccgctcgcc
gaccacatcgcgcggcgattcgacggtcgcggtgagccgcgtgaagatctggtccaggtg
gccagagtcggactcgtcaacgcgataaaccggttcgatgtcgaggccgggtcggacttc
gtgtcattcgcggtgccgacgatcatgggggaggtccggcgccacttccgcgataacagc
tggtcggtgaaggtgccgcgccggctcaaggaactgcacctgcgcctcggcgcggcgact
gcggagctgtcccagcggctgggccgtgccccgaccgcctcggagctcgccgaggaactc
gacatggaccgcgaagaggtgatcgagggtctggtcgcgggcagctcgtacaacaccctg
tcgatcgacagcggcggcgggggcgacgaagatgcccccgcgatagtcgacacgctcggc
gatctggacgccggcctggatcgaatcgacaatcgagaaacactgcggccgttgctcgct
caacttccagagcgggagcggacggtgttgatcctgcggttcttcgaatccatgacgcag
acgcagatcgccgagcgggtcggtgtctcgcagatgcacgtatcgcgactgctcgcgaaa
tcgctagcgcgacttcgcgaccagctgcagtag
DBGET
integrated database retrieval system
