Mannheimia bovis: ICJ55_00745
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Entry
ICJ55_00745 CDS
T07212
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mbos
Mannheimia bovis
Brite
KEGG Orthology (KO) [BR:
mbos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbos03009
]
ICJ55_00745 (srmB)
Enzymes [BR:
mbos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ICJ55_00745 (srmB)
Ribosome biogenesis [BR:
mbos03009
]
Prokaryotic type
rRNA helicases
ICJ55_00745 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QNS15315
UniProt:
A0A7H1C2W0
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All DBs
Position
complement(133604..134932)
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AA seq
442 aa
AA seq
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MSELMTFEELDLSPQLLKALVKKGYSRPTAIQQATIPAALEGRDLLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRILVLTPTRELAMQVAEQAEELAQFTNLSIATITGGVAYQNH
GEVFNSNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEADRMLQMGFGQDAEKIAAETR
WRKHTWLFSATLEGELLEDFSERLLNDPIKVDAEPSRRERKKIQQWYYHADNVEHKTKLL
ARLIGEFSIEKAIVFVRRREDVRELSDTLRKRGIRSTYLEGDMAQTQRNQAIARLKEGVV
NVLVATDVAARGIDIDDVDFVINYDLPYSADTYLHRIGRTARAGKKGSAVSLVEAHDYKL
LGKIKRYTEEALKPRIIEGLEPRTKAPKDGELNITSKKEKARIKKKKEVKKEAAKQKVKV
RHKDTKNIGKRRKPSSEANLVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattaatgacctttgaggagcttgatttaagccctcaacttctaaaagcctta
gtaaaaaagggctatagccgcccaacggcaattcaacaagccactattccagccgcactt
gaagggcgtgatttactgggttctgctccaaccggcacggggaaaaccgcagccttcttg
ctgccggcgattcaacatttattagactacccacgtcgtaagccgggagctccgcgtatt
ttggtacttacacctactcgagagctggcaatgcaagtggcggagcaagcagaagagctg
gcacaatttaccaacttaagtattgcgaccattacaggcggagtggcgtatcaaaatcac
ggcgaagtctttaacagtaaccaagatattgtggtagcaacgccggggcgtttgatgcaa
tatatcaaagaagaaaactttgattgccgagcggttgaagtgttgatttttgatgaagca
gaccgaatgttacaaatgggctttgggcaagatgcagagaaaattgccgctgaaactcgt
tggcgtaaacatacttggttattctcagccactcttgaaggggaattgttggaggatttc
tctgagcgattattaaacgacccaataaaagtagatgcagagccaagtcgccgtgagcgg
aaaaaaatccagcagtggtactatcacgctgataacgtggagcacaaaactaaattgttg
gctcgccttattggagaattttcgattgaaaaagcaattgtgttcgttcgtcgccgtgaa
gatgtgcgagaactaagcgacacacttcgcaagcgaggtattcgttcaacttaccttgag
ggcgatatggcacaaacccaacgtaaccaagcgattgctcgtttaaaagaaggagttgtt
aatgtactggtagcaacagatgtagcagctcgaggcattgatattgatgatgtggatttt
gtaatcaactacgacttaccatacagtgccgatacttacctccaccgcatagggcgaacc
gctcgtgccggcaaaaaaggttcggcggtttcgctagtagaagctcacgattacaagctg
ctcggtaaaatcaagcgttatacggaagaagcattaaagccgcgtattatcgaaggctta
gaacctcgcactaaagccccgaaagacggagagctgaatattacgagcaaaaaagaaaaa
gcccgtatcaaaaagaaaaaagaggtaaaaaaagaagcagcgaagcaaaaagtgaaagtt
cgccataaagatactaagaatattggtaaacgccgcaagccaagcagtgaagccaattta
gtgaaataa
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