Mannheimia bovis: ICJ55_07660
Help
Entry
ICJ55_07660 CDS
T07212
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mbos
Mannheimia bovis
Pathway
mbos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ICJ55_07660 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbos03400
]
ICJ55_07660 (sbcB)
Enzymes [BR:
mbos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ICJ55_07660 (sbcB)
DNA repair and recombination proteins [BR:
mbos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ICJ55_07660 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ICJ55_07660 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ICJ55_07660 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Intu_longin_3
EF-hand_14
GAGA
Motif
Other DBs
NCBI-ProteinID:
QNS14626
UniProt:
A0A7H1C0X1
LinkDB
All DBs
Position
1536660..1538204
Genome browser
AA seq
514 aa
AA seq
DB search
MSKSFSFFFYDYESFGVSPAHDRPAQFAGIRTDEEFNIIGEPVMFFCKQTPDYLPSPEAV
MVTGITPQQCNAEGVSEPEFAARIHAEFSQPNTCTIGYNNIRYDDEMTRYTFFRNFYDPY
EYSWKNGNSRWDLLDLVRACYALRPEGIEWSKDENGMPSFKLENLTKANGIAHENAHDAM
SDVYATIAMAKLIKEKQPKLFNFFFNLRSKKEVEKLIDTGEMTPLVHVSGMLGNYRGNTA
WVVPLAWHPTNQNAVIVCDLSGDMNGLLNENAEILRQRLYTKREELADNELPVPLKLVHI
NKCPILAPAKTLLPENAERLGIDRALCLENLKALKAHKSLVREKVLEIFNDERTFEPSAN
VETTLYDGFFSTADKNNMTILRSLPPESLADHGLKFEDPRVEQLLFHYRARHYSQTLTRA
EQIKWQKYCHQQIDAKAEQFANAIDALFQQHHDNPEIVKLLENLTAYAEQISQKQTVVYA
KNSEDETLVSDLNKVAEQPLDKADKLKLLKELIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcattttcttttttcttttacgactatgagagttttggggtaagtccggct
cacgatagaccggctcagtttgcgggtattcgtactgatgaagagtttaatatcatcggt
gagccagtaatgtttttctgtaagcaaacgccagactatttaccaagccctgaagccgtt
atggtaactggtattacaccgcaacaatgtaacgctgagggagtgtctgaacctgagttt
gctgctcgtattcacgcagaatttagccagccaaatacttgtaccatcggctataacaat
atccgttatgacgatgaaatgacccgctacactttttttcgcaatttttacgatccgtat
gaatacagttggaaaaacggtaattctcgttgggatttattggatttagtaagggcttgt
tatgcgttgcgtccggaaggcattgagtggtcaaaagatgaaaatggaatgccgagcttt
aaactagagaatttaactaaagcaaacggtattgctcacgaaaatgctcacgatgcgatg
tcggatgtgtacgctaccattgcgatggcgaaattaattaaggaaaaacagccgaaatta
ttcaattttttcttcaatctacgcagtaaaaaagaagtggagaaactgattgatacaggc
gaaatgacaccgctcgttcacgtttcgggaatgttagggaattatcggggtaataccgct
tgggttgtgccattggcttggcatcctactaatcaaaatgcggtgattgtgtgtgattta
tcgggcgatatgaatggtttgctcaatgaaaatgctgaaattctacgccaacgcctatat
accaaacgtgaggagttagctgataacgagctacctgtgccattaaaattagtgcatatc
aataaatgcccgattttagctcctgcaaaaaccttgctacctgaaaatgcagagcgatta
ggcattgatagagcattatgtttagaaaatttgaaggcattaaaagcacataaatcgttg
gttcgagaaaaagtgttggaaatctttaatgatgaacgcacatttgagccttcagccaat
gtagaaacgacactttatgacggttttttctcaactgcggataaaaacaatatgacaatt
ttacgctccttgccacctgaaagtttagcggatcacggattaaaatttgaagatcctcga
gtggagcaacttttattccattatcgagcaaggcattattcacaaactctgacaagagca
gagcagattaaatggcagaaatattgccaccaacagattgatgcaaaagccgaacagttt
gcgaacgctattgatgctttgttccagcaacatcacgataatccggaaatagtaaaatta
ttggaaaatctgaccgcttacgctgaacaaatctcacaaaaacagactgtggtttatgct
aaaaatagcgaagatgaaacgctagtgagcgatttgaataaagtagcagagcaaccatta
gataaagcagacaaattaaagttattaaaggaattaatcaaatag
DBGET
integrated database retrieval system
