Mycoplasmopsis bovigenitalium: MBVG596_0886
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Entry
MBVG596_0886 CDS
T05188
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mbov
Mycoplasmopsis bovigenitalium
Pathway
mbov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBVG596_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbov03019
]
MBVG596_0886
Messenger RNA biogenesis [BR:
mbov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MBVG596_0886
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAW18463
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Position
631476..633314
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AA seq
612 aa
AA seq
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MKPTKLVAIGGVQEIGKSSLFVEYGDNIFIIDAGIKFADTASTGIKGIIPDYSYLAENHK
KIKGLFITHGHEDHIGGVVYLVKQVPIKKIFAPRIAIQYLKLKFEEHKVPSGIQFIEIEK
SAVHKFGKCSVDFWTAQHSIPDAFGVRVNTPNGSVMCTGDFRFDYNPIGESYTDFARLDQ
IGKEGLTVLLSDSTNAMRPLHSPSENDILKDIEKYMRQAERKIIITAFASNLIRVKAIIE
LASKLGKKVATFGRSMVNGVKIGRKLGYINVDSKVLVDKKQVANIPDNELVILTTGSQGE
QLAALARMSHGKHPTVKIKKGDLIIFSSSPIPGNHMVIELLINRLAKLGADIKENGVDGY
LHTSGHAYKHEHYKIFQLTKPKYFIPYHGEYRMCIAHSQSAIKSGVKPENIFIPEKGRVY
HIINQKVFETNEKIDYGPIYIDGHSILNLNSSVIKERQNLGESGFANIAITVDRKNKNII
GRPSLISRGAFYVKTSLSLVNEAKRIAHGAALYYVKNTENFNVMELKQLIIDRLENFFYN
KKRRRPIIIPTILYNDDKNEEILSNSKFNFVKKDKSDSKNTELLLKNIKAEMFGDNSDIE
DIHEDEEDDEIE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaacaaaattagttgctattggtggtgttcaagagattggaaagtcatcactt
tttgttgaatatggtgataatatttttattatcgatgctggaattaaatttgctgatact
gcttcgaccgggattaaaggaattattccagattattcatatttagctgaaaatcataaa
aaaattaaaggtttatttattactcacggccatgaagatcatattggtggagttgtatat
ttagtaaaacaagtgccaattaaaaagatatttgcaccacgaattgcaattcaatattta
aagctgaaatttgaggaacacaaagtaccttcaggaattcaatttattgaaattgaaaag
tctgctgttcataaatttggcaaatgttcagttgatttttgaactgcacaacactcaatt
ccagatgcatttggtgtgcgcgtgaatactcctaatggttcagtaatgtgtactggtgac
tttagatttgattataatccaattggcgaaagctacacagatttcgccagattggatcaa
attggtaaagaaggtttaactgttttattatcagattcaaccaatgcaatgcggccactt
cattcaccatctgaaaatgatattttaaaagacattgaaaaatacatgagacaagctgaa
cgcaaaataataataactgcctttgcttcgaacttaattagagttaaagcaattattgaa
ttggcatcaaaattaggcaaaaaagtcgcaacatttggtcgctcaatggtaaatggtgta
aaaatcggacgtaaattaggttacattaatgttgatagtaaagttttagttgacaaaaaa
caagtagcaaatattcctgacaatgaattggtgattttgacaactggttcgcagggtgag
caacttgcagctcttgcgagaatgtctcacggaaaacacccaactgttaaaattaaaaag
ggagacttaattattttctcatcaagtccaattccaggcaatcatatggtaattgagcta
ctaattaatagacttgcaaaacttggcgccgacattaaagaaaacggtgttgatggctat
ctgcatacttcaggtcatgcttataaacatgaacactacaagatttttcagttaactaaa
ccaaaatactttattccatatcatggtgaatatagaatgtgtattgcgcatagtcaaagt
gctattaaaagtggcgttaaacctgaaaatatatttatccctgaaaagggtagggtttat
cacataatcaatcaaaaagtatttgaaactaatgaaaaaattgattatggaccaatttat
attgatggtcacagcatattgaatttaaactcttctgtaattaaagaacgtcaaaattta
ggagaaagtggatttgctaatattgctataactgttgatagaaaaaacaaaaatataatt
ggtagaccttctttaatctctcgtggcgcattttatgttaaaacttcattaagtttagtg
aatgaagcaaaacgaattgcacatggtgctgcgctttattatgtaaaaaatactgaaaat
ttcaatgtaatggagctaaaacaactaattattgatagattagaaaactttttctataac
aaaaaacgtcgtagaccaatcataattcccaccattttgtacaatgatgataaaaatgaa
gaaattctttcaaactctaagtttaatttcgttaaaaaagataaaagtgattcaaaaaat
actgaattattattgaaaaacatcaaagctgaaatgtttggcgataattccgacattgaa
gacattcacgaagatgaagaggatgatgaaatcgaataa
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