Mycoplasmopsis bovigenitalium: MBVG596_1086
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Entry
MBVG596_1086 CDS
T05188
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mbov
Mycoplasmopsis bovigenitalium
Pathway
mbov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MBVG596_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbov03021
]
MBVG596_1086
03400 DNA repair and recombination proteins [BR:
mbov03400
]
MBVG596_1086
Enzymes [BR:
mbov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MBVG596_1086
Transcription machinery [BR:
mbov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MBVG596_1086
DNA repair and recombination proteins [BR:
mbov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MBVG596_1086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BAW18561
LinkDB
All DBs
Position
complement(781103..785533)
Genome browser
AA seq
1476 aa
AA seq
DB search
MTNKILYNTLTFLEAQMSRFNNESKLSIDKITLSLATDKDVTNWSNGEVTKPETINYKSY
KPEREGLFDEIIFGPTTDYKCPVCNTKYKRSDENTDCIRTPMCVKHKPKILPKITRRSRM
GHIALKNPVVHFWFFKIDHSIISKLLGLKVANSSKSVTKSELEKLIYYKSHIVLEDGGLK
SLKKNTIIDISDAAAIYYEALLELKEKFDPNGDEFEQEAYEVIDEAITELTEQATSKMGQ
DYGIDFYEYNEIIHEYSDALISTGSKAIEYLLENVDPAEEARKLEREIEEINEQISLNPN
GAAKIQERSKLYKRLTVINAFIKSGQDPKSMLIYNLPVIPADLRPLVQLDGGRHSTSDVN
ELYRRIIIRNNRLKKWEETDAPMLIKQNEYRMIQEAVDSLIDNARKKPNPVASKDGRPFK
SISDALTGKKGRFRQNLLGKRVDYSGRSVIVVGPELKMHQVGIPREMAAKLFEPWIIREL
IKSDKNNINSIKAGKKAVENLDPIIWPYVEKAIQGRPVLLNRAPTLHRLSIQAYEPVLIR
GKAIKLHPLSCTPFNADFDGDQMAVHVPISPEAAREARELMLASKNILGPKDGEPIINPG
QDMILGLYYLTQEKPGALGEGKFFATYEDMLTAYENKVVSVHSRVVLPIEQVNKKWINSD
GNYRYITTTVGKFIFNRAFPNSFEFIFGKYIEANGKEVVHSSKSSQQLQHYLIKPGTNFA
EHIAQMPINLALTKKDIAKIVRNVYDQYVSVICMEDLANVISDIDKDNLDKIFEKCAALK
DYKGEQIDISHAEILTRFIHEEFNEIQYIVTAGYNNEEAIWTLDDYTKLLESVWFRYTNV
VANVLDKIKALGFKFSTISGTTIAVSDVITLPETKNKIKEGEIYIEKLKSFFEEGMLTDD
ERYSLSIKKWAEIKNSIEDDLKQVTKSDPYNPLFMMFTSGARGNSSNFVQLAGMRGLMNN
NVKILKADAENERVVRSTVEIPVKSSFLEGLTAYEFYSSTHGARKGLTDTALNTAKSGYL
TRRLVDVAQGIVVKEPDCGTDYGFVVDDIKDNKTNTIIESLAERIEGRFTNKPIFDANGE
LIIAANQLITPEIVDKITAANIKEVEIRSVLSCYSRNGVCQKCYGKDLALNRIVNIGEAV
GVVAAQSIGEPGTQLTMRTFHTGGVAGVEDITGGFGRLMELIDAYDSPWGRPAIISPGYG
SVLSIYSPTETSHRNIKFIDIEIFNDADDKEVITFETKADRRIVVKEGDKLIPGQKIVEG
PVVLGDLLKYADTRSVQNYLLQEVQKLYRLQGISIADKYIEIIIRQMLSKVMITDTGDSK
FFTGSLVDILAFQKESARLLAEGKRPPFGEVKIKGAKQTPLLSDSFLAAASYQETPKILV
NASISAQSDRLEGLKENIILGRKIPAGTNSNFDQKGKYDIRDPRSYFSSKYKLDEQILEE
DYSLDNFEAHLMDVEELFSELNIEDVQDIDDQDFAE
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaagatactttacaacactttgacatttttggaggcacaaatgagtagattt
aataacgaatccaaattatcaattgacaaaataactctatcattagccactgacaaagat
gttacaaactgatcaaatggtgaagttactaagcccgaaacaattaactacaaaagctac
aaacctgaaagagaaggtctttttgatgaaataatttttgggccaactactgactataaa
tgtccagtatgtaacacaaaatataaacgtagcgatgaaaacacagattgcattagaacc
ccaatgtgtgtaaaacacaaaccaaaaattctacctaaaatcacacgtagaagtagaatg
ggtcatattgctcttaaaaatcctgttgttcacttttgattctttaaaattgaccactca
attatttcaaaattattaggattaaaagttgctaattcttctaaatcagttaccaaatct
gaattagaaaaactaatttattacaaaagccatatcgttcttgaagatggcggactaaaa
tcattaaagaaaaatacaattattgatatttctgatgctgccgctatttattatgaagcg
cttttagaattaaaagaaaaatttgaccctaatggtgatgaatttgagcaagaagcttat
gaagttatcgacgaagcaattactgagttaactgaacaagcaacatcgaaaatggggcaa
gattacggtattgacttttatgaatacaacgaaattattcatgaatactctgatgcatta
atttcaactggttcgaaagcaattgaatatctactagaaaacgttgatccagctgaagaa
gctcgtaaacttgaaagagaaattgaagaaattaatgaacaaatttcactaaatcctaat
ggtgcagctaaaattcaagaaagatctaaactttacaaacgtttaactgtaattaatgcc
tttattaaatctggtcaagaccctaaatctatgttgatttacaacttgccagttattcca
gctgatttgcgtccattagttcaacttgatggtggacgtcactcaacaagtgatgttaat
gaactttaccgtcggatcattataagaaacaatcgtcttaaaaaatgagaagaaaccgat
gctccgatgttaatcaagcaaaacgagtaccgtatgattcaagaagcagttgactcacta
attgataatgcgcgtaaaaaaccaaacccagttgcctcaaaagatggccgtccattcaag
tcaatttctgacgcattaactggtaaaaaaggtcgtttccgtcaaaacttacttggtaaa
cgtgttgactactcaggacgttcagttattgttgttggtcctgaactaaaaatgcaccaa
gttggtattcctcgggaaatggcggctaaattatttgaaccttgaattattagagaactt
attaaatctgacaaaaacaacataaattcaattaaagcgggtaaaaaagcagttgaaaac
ttagacccaattatttgaccatatgttgaaaaagcaattcaaggtcgtccagtgcttcta
aaccgtgcgccaacattacaccgtttaagtatccaagcttatgaacctgttttaattcgt
ggtaaagcaatcaaattgcacccactttcatgtaccccattcaacgctgacttcgatggt
gaccaaatggctgttcacgttccaatcagtcccgaagctgctcgcgaagctcgagaatta
atgctagcttcaaaaaatattttggggccaaaagatggtgaaccaattattaaccctggt
caagacatgattcttggtctatactatctaacccaagaaaaaccaggcgctttaggcgag
ggtaaattctttgcaacttatgaagatatgttaacagcctacgaaaataaagttgttagt
gttcattctagagttgtattaccaattgaacaagtaaataaaaaatgaattaattcagat
ggcaattatagatatatcacaactactgttggtaaatttatctttaacagagcctttcca
aatagttttgaattcatttttggtaaatatattgaagcaaatggtaaagaagttgttcat
agttcaaaatctagccaacaacttcaacattatttaatcaaaccaggtacaaattttgct
gagcatattgcccaaatgccaattaatttagctcttactaaaaaagatatagctaaaata
gtgcgtaacgtttatgatcaatatgtaagtgttatttgcatggaagatttagctaatgta
attagcgacattgacaaagataatttagataaaatctttgaaaaatgtgccgcacttaaa
gattacaaaggcgaacaaattgatatttcacacgctgaaattttaactagatttatccat
gaagaatttaacgaaattcaatacattgtaacagccggttacaacaatgaagaagctatt
tgaacattggatgactatactaaattgcttgaatcagtttgatttagatacactaatgtt
gttgcaaatgttttagacaaaattaaagcattaggtttcaaattctcgactatttcgggt
actacaattgcagttagtgatgttattaccctacctgaaaccaaaaataaaatcaaagaa
ggtgaaatttacattgaaaaattaaaatcattcttcgaagaaggtatgctaaccgacgat
gaaagatatagtttatcaatcaaaaaatgagctgaaattaaaaactcaattgaagatgat
ttaaaacaagtaactaaatcagatccttataaccctctattcatgatgtttacatcaggg
gcccgtggtaattcatctaactttgttcagcttgctggtatgcgtggacttatgaataac
aacgttaaaattcttaaggccgatgccgaaaacgaacgtgttgttcgttcaactgttgaa
attcctgttaaatcatcattccttgaaggtctaacagcttatgaattctattcatcaact
cacggggctagaaaaggtcttaccgatactgcgcttaacaccgccaaatcaggttatcta
actcgtcgtttagtcgatgttgctcaaggtattgttgttaaagaaccagattgtggtact
gactatggttttgttgttgacgatattaaagacaataaaacaaacacaattattgaatca
ttagctgaaagaattgagggtagattcactaacaaaccaatttttgatgctaatggtgaa
ttaataattgctgctaaccaactaattacacctgaaatagtagacaaaattactgctgca
aacattaaagaagttgaaattagatcagttttatcttgttattcacgtaatggtgtttgt
caaaaatgttatggtaaagacttagctttaaaccgtattgttaacattggtgaagctgtt
ggtgttgttgctgcacaatcaattggtgagcccggaactcagctaaccatgcgtacattc
catactggtggggttgctggtgttgaagatattactggtggttttggtcgtctaatggaa
ttaattgacgcctatgactcaccttgaggtcgtcctgctattatttctccaggatatggt
tcagttttatctatttattcaccaactgaaacatcacaccgcaacattaaattcattgat
attgaaatattcaatgatgctgatgacaaagaagttattacttttgaaacaaaagctgac
cgtagaattgttgttaaagaaggtgacaaactaattcctggtcaaaaaattgttgaaggt
ccagttgttttaggtgatttattaaaatacgctgacacacgttcagtacaaaattacttg
ctacaagaagttcaaaaactttaccgtctacaaggtatctcaattgctgataaatacatt
gaaatcattattagacaaatgctttcaaaagttatgattacagacactggcgattctaaa
ttctttactggttcattagtagatattttagcattccaaaaagaatcagctcgtttatta
gctgaaggcaagcgtccaccatttggtgaagttaaaatcaaaggcgcaaaacaaactcca
ttattatctgactcatttttagctgctgcatcatatcaagaaacacctaaaattcttgtt
aatgcgtcaatttcagcacaaagcgacagattagaaggcttaaaagaaaatattattcta
ggacgtaaaattcctgctggtacaaactctaattttgaccaaaaaggtaaatacgatatt
cgtgatcctcgttcatatttctcttctaaatacaaacttgatgaacaaatacttgaagaa
gattactcactagacaattttgaagcccacttaatggatgttgaagaattgttctcagag
ttaaacattgaagatgtgcaagacattgacgatcaagatttcgcagaataa
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integrated database retrieval system
