Maize bushy stunt phytoplasma: MBSPM3_v1c1150
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Entry
MBSPM3_v1c1150 CDS
T04456
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mbp
Maize bushy stunt phytoplasma
Pathway
mbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBSPM3_v1c1150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbp03019
]
MBSPM3_v1c1150
Messenger RNA biogenesis [BR:
mbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MBSPM3_v1c1150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AOF54649
UniProt:
A0ABN4RY44
LinkDB
All DBs
Position
121852..123543
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AA seq
563 aa
AA seq
DB search
MNNLDPKINNYNSDVSFFALGGLGEVGKNMYVFEIHKQIFIVDSGILFSDDFLLGVNYVI
PDYDYLLKNESRIVGLFVTHGHEDHIGGIPYLLKKVRIPKIFVSGIAYYLLEHKLSEHKE
IGALPKIEKYSHDTKYEFSHQVNVSFIRLNHSIPDTFGIVFNTKYGNIFYTGDFKIDYTP
VGPEAQYDKLIKIKQEGVLCLLSDSTNAEQSGLVQSESTIGASINELFVNIADRIIIVTF
ASNFYRIKQIVEAAIQTKRKVAVFGRSMEKALEIGKKHGYLNIPEGTLVTSNNIHKYRDI
ILLCTGSQGEPLAALSRIANNTHRQIKLSPKDTIIFSSSPIPGNQENINKIFDLLFKKNV
NVITHGPLINTHVSGHGNQNDLKLMLSLTKPKYFIPVHGEHRMLIAHKNLALECGIPESN
IFILENGQMVSLSPGKAAITEKMNVGNVFIDASGIDDVGNAILKERRSLSEKGLFSVVMS
IDLKRKKVLNLPTIVSRGFIYMKDNQEMIKQISYDIKNSIETAIKQDEVQKETLNKIIVD
YLASKIYGITLRNPIIIPIILTF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttagacccaaagattaataactataattccgatgtttctttctttgctttg
ggagggcttggcgaagttgggaaaaacatgtatgtttttgaaattcacaagcaaattttt
attgtagattcagggattttgttttcagatgattttttgttaggagtcaattacgtcatc
cccgattatgattatttattgaaaaacgaatcgcgtattgtagggctttttgttactcac
ggacatgaagatcatattggaggcattccttatttgcttaaaaaagtgcgtattcctaaa
atttttgtctcagggattgcatattatttgttagaacataaattatcagagcataaagaa
attggcgccctgcccaaaatagaaaaatacagccatgataccaaatacgaatttagtcat
caagtaaatgtgtctttcatcagacttaaccactctattcctgacacttttgggatcgtt
tttaacaccaaatacggcaatattttttatactggggattttaaaattgattatactcca
gtaggtccagaagcgcaatatgataaattaatcaagattaaacaagaaggcgttttgtgc
ctactttctgattctactaatgccgagcaatctgggttggtccaatccgaaagtactatt
ggggcttccattaatgaactttttgtaaatattgcagaccgcatcattattgttactttt
gcttctaatttttaccgcatcaaacaaattgtagaagctgctattcagactaaaagaaaa
gttgcagtgtttgggcgcagcatggaaaaagctttggaaattggcaaaaaacatggctat
cttaacattcctgaaggaacccttgtcacaagtaataacattcacaaatatcgcgatatt
atcttgctttgcaccggctcacaaggagagcccttagcagctttaagcagaattgctaac
aacactcacagacaaattaagttaagtcccaaagatactatcattttttcttcttctccc
attcctggcaaccaagaaaacattaataaaatctttgatttacttttcaaaaaaaatgtc
aacgttatcactcacggacctttaattaatactcacgtatcaggacacggtaaccaaaat
gacctgaaattgatgctttcgcttaccaagcctaaatattttattccagttcacggcgaa
catcgcatgttaattgcacacaaaaatttagctctagaatgtggcattccagaaagtaat
atttttattttggaaaacggacaaatggtaagcttatctcctggaaaagctgccattacc
gaaaaaatgaatgtaggcaacgtctttatcgatgcttctggaatagacgatgtgggcaat
gcaatcctaaaagaacgtcgtagtctgagtgaaaaaggcttattttctgttgttatgagt
attgatttaaaaagaaaaaaagtccttaatttgcccacaattgtttctcgtggctttatt
tatatgaaagataatcaagaaatgattaaacaaatttcttatgatattaaaaatagtatt
gaaactgctattaaacaagatgaagtgcaaaaagagactttaaacaaaattatcgttgat
tatcttgcctctaaaatatacggaattactttaagaaatccaattattattcctattatt
ttgacattttaa
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