Maize bushy stunt phytoplasma: MBSPM3_v1c1400
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Entry
MBSPM3_v1c1400 CDS
T04456
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
mbp
Maize bushy stunt phytoplasma
Pathway
mbp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MBSPM3_v1c1400 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbp03021
]
MBSPM3_v1c1400 (rpoE)
03400 DNA repair and recombination proteins [BR:
mbp03400
]
MBSPM3_v1c1400 (rpoE)
Transcription machinery [BR:
mbp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MBSPM3_v1c1400 (rpoE)
DNA repair and recombination proteins [BR:
mbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MBSPM3_v1c1400 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TFIIE_beta
Motif
Other DBs
NCBI-ProteinID:
AOF54674
UniProt:
A0ABN4RYA2
LinkDB
All DBs
Position
147865..148374
Genome browser
AA seq
169 aa
AA seq
DB search
MKKTKTPKSLLETAYDIMKKHNNPVPVYDLLKQTLQKHQIPNNNPNVANQLYLDIALSGK
FVFCEDNQLIIKENNKLFWDKDFFEKTQISNDEPLDEDTNLQELDFEDFLSDKDTVQTDP
LQDDLLDLEDEPSEEQNKDDDKIEDDIVLEDKDDYEDPLEEECEHLYEK
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccaaaactccaaaatcacttttggaaactgcttatgacattatgaaaaaa
cataacaatcctgtcccagtctatgatttattaaaacaaacattgcaaaaacatcaaatc
ccaaataacaaccccaatgtagctaatcagctttatttagacatcgctttgagcggaaaa
tttgttttttgtgaagacaatcaattaattattaaagagaataataaacttttttgggat
aaagatttttttgaaaaaactcaaatttcaaacgacgaacctctagacgaagataccaat
ttacaagaattagattttgaggatttcctttctgacaaagacactgtccaaactgaccct
ctacaagatgatttgcttgatttagaagacgaaccttcagaagaacaaaacaaagacgat
gacaaaattgaagatgatattgttttagaagacaaagatgattatgaagatccattagaa
gaagaatgcgaacatctttatgaaaaataa
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