Maize bushy stunt phytoplasma: MBSPM3_v1c3030
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Entry
MBSPM3_v1c3030 CDS
T04456
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbp
Maize bushy stunt phytoplasma
Brite
KEGG Orthology (KO) [BR:
mbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbp03032
]
MBSPM3_v1c3030 (topA)
03400 DNA repair and recombination proteins [BR:
mbp03400
]
MBSPM3_v1c3030 (topA)
Enzymes [BR:
mbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MBSPM3_v1c3030 (topA)
DNA replication proteins [BR:
mbp03032
]
Prokaryotic type
DNA Topoisomerases
MBSPM3_v1c3030 (topA)
DNA repair and recombination proteins [BR:
mbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MBSPM3_v1c3030 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AOF54814
LinkDB
All DBs
Position
complement(330800..332743)
Genome browser
AA seq
647 aa
AA seq
DB search
MKSKVIIVESPAKTKTLNRFLNDEFLILSSKGHIRDLSLKGKDRMGIDIEKGFIPKYSII
KEKDNIVETLIQKTKGKEVLLATDPDREGEAIAWHLSQILNLDPQKTNRIVFREITKEAV
LKALQQPRKIDELLVFSQETRRMLDRIIGFKLSRLVRRLKSQSAGRVQSVALKLIVDLEE
KIKAFVAEEYYIIIAFFKDFQAEYQNPYKGKTKAKEAFKIVQQITDKPFLVKELKQKKAK
QSPKPPFITSTLQQEAINSLNMTSNQVMRIAQKLYEGVDILGESIGLITYMRTDSQRLAD
SFVKDAQKLIKTQYGKEYLGTYKTNKKAQSQDAHEAIRPTDLSKTPESLAPHLDKYENKL
YKLIYQRTLASLMTPAIFQKTQVFFEVANHLFLTEGLIKIFDGYQKILQDGTKDKIIPSF
KLNETYLPQEIQNLQKFTNPPARFSESTLIKTLEKLNIGRPSTYSQIIFTLKKRIYVDLV
EKRFVPTEQGILTSKNLELFFKQIIDVKYTAKMEENLDKISSGLVNNKELLQEFYDAFKQ
LYQIADQKLEKPKDIETDQKCNLCNAPLLIKKGRYGNFLGCSRFPECKNIVSLKEKSSSV
ETNPSMQTDQKCNLCNAPLLIKKGRYGNFLGCSRFPECKNIVKIKKT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaagttattatagtagaatctcctgctaaaaccaaaactttaaaccgtttt
ttaaatgacgaatttttaattttatcttccaaaggtcatattagagatttgtcgctaaaa
ggcaaagacagaatgggaattgacatcgaaaaaggatttattcctaaatacagcattatc
aaagaaaaagacaatatcgtagaaactcttatccaaaaaactaaaggtaaagaagtgcta
ttagcaaccgatcctgatcgcgaaggagaagcaattgcttggcatttatcacaaattctt
aatttagacccccaaaaaactaatagaattgtttttcgagaaattaccaaagaagcagtc
ttaaaagctttgcaacaacctcgcaaaatcgatgaactattagtgttttcacaagaaact
cgcagaatgctagatcgtattattgggtttaaactgtcgcgtttggtaaggagactcaaa
tcacaatcagcaggaagagtgcaatcagttgcccttaaattaattgttgatttagaagaa
aaaataaaagcttttgtcgctgaagaatactatattattattgctttttttaaagatttt
caagcagaataccaaaatccttacaaaggcaaaacaaaagccaaagaagcttttaaaatt
gtccaacaaatcacagataaaccctttttagttaaagaattaaaacaaaaaaaagccaaa
caatcacccaaaccaccctttattacatctaccctgcaacaagaagccatcaacagccta
aatatgacttctaatcaagttatgagaattgctcaaaaactttatgaaggagttgatatt
ttaggtgaatctatagggttaattacttatatgagaacagattcgcaaagacttgcagac
agctttgttaaagatgctcaaaaattaattaaaacacaatatggcaaagaatatttaggt
acttacaaaaccaataaaaaagctcagtcgcaagacgctcacgaagctataagacccact
gatttatccaaaacccccgaaagcctagcccctcatcttgataaatacgaaaataaactc
tataaacttatttatcaaagaactttggcttctttaatgacacctgccatatttcaaaaa
acccaagttttttttgaagttgcaaaccatctttttttaactgaaggtttgataaaaatt
ttcgatggctatcaaaaaattttgcaagatggcaccaaagacaaaattattccttccttt
aaattaaatgaaacttatttacctcaagaaatccaaaatttacaaaaatttactaatcct
ccagcacgcttttctgaatccactttgattaaaactttagaaaaactaaatattggaagg
ccttctacttactctcaaatcatttttaccctcaaaaaaagaatttatgttgatttagta
gaaaaacgttttgttcctaccgaacaaggaattttgacttctaaaaacttagaattgttt
ttcaaacaaattattgatgttaaatatactgccaaaatggaagaaaatttagataaaatc
tcttcaggattagttaataataaagaattattgcaagaattttatgatgctttcaaacaa
ctttatcaaatagccgatcaaaaattagaaaaaccaaaagatatcgaaaccgatcaaaaa
tgtaatttatgcaatgcccctttacttatcaaaaaaggacgctatggtaattttttaggt
tgcagtcgctttcctgaatgtaaaaatattgtttctttaaaagaaaaatcaagttctgta
gaaacaaatccttctatgcaaaccgatcaaaaatgtaatttatgcaacgctcctttactc
atcaaaaaaggacgctatggtaattttttaggttgcagtcgctttcctgaatgtaaaaat
attgttaaaattaaaaaaacttaa
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