KEGG   Monosiga brevicollis: MONBRDRAFT_17908
Entry
MONBRDRAFT_17908  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
mbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MONBRDRAFT_17908
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_17908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_17908
   03041 Spliceosome [BR:mbr03041]
    MONBRDRAFT_17908
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MONBRDRAFT_17908
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MONBRDRAFT_17908
Spliceosome [BR:mbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MONBRDRAFT_17908
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5889079
NCBI-ProteinID: XP_001743856
JGI: 17908
UniProt: A9UT55
LinkDB
AA seq 92 aa
MEGYMNKAVTIATQDGRLLTGILKGFDQSTNLILNQCYERVFSLHSGVEIVPMGLYIVRG
DNVAVVGETDEETDATLDLENVKAAPLNPVVY
NT seq 279 nt   +upstreamnt  +downstreamnt
atggagggctatatgaacaaggcagtgaccatcgcaactcaagatggacgcctcttgacg
ggcatcttgaaagggtttgaccaatcaaccaacctcattttgaatcagtgctacgagcgt
gttttctccctacactcgggcgtcgaaatcgtgcccatgggcctctacattgtgcgcggc
gacaacgttgccgtggttggcgaaacagatgaggagacagatgcgacactggatctggag
aatgtcaaggccgctcccttgaatcctgtcgtgtactag

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