Monosiga brevicollis: MONBRDRAFT_22501
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Entry
MONBRDRAFT_22501 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
mbr
Monosiga brevicollis
Pathway
mbr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MONBRDRAFT_22501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_22501
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MONBRDRAFT_22501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
DUF4042
Motif
Other DBs
NCBI-GeneID:
5887881
NCBI-ProteinID:
XP_001742409
JGI:
22501
UniProt:
A9UQS2
LinkDB
All DBs
AA seq
1925 aa
AA seq
DB search
MSATVGAGASVPATPKLALFKAQADGPEKASPLRHVEGPTQAAGAPPTFLRLLRIFDTPK
FQPSLVSKTHLKEMTNLLDFFKPASDSSKQALRQELLPSSLSADSAEHVVKKRRFEWIDS
LAYLLNLHHEQARALVEQYVANSRPSQGTEHLDHYLMSEDLAANLRAKLVKFYLTTRQRA
LEMVGFILAKSEESEYGTLASTLLAHNPQEPSALLVNLTQQYLKPSLQLHFASLLAARED
RATKRAVCCVCVCVCVCVCVCVCVCVCVCVCVQAAAGQHAYPAATRCVSRHHQRCCTRFL
TKISAGSKKDQASAQLLTDRLEELFMHACLAEARLLLSILSFVLALTDITEREMKLIVPL
FQQQILRQEALFSGTTWWQTNRERWQSTVRSIRVELVLVMLSCIQAHQLDDILSDLASCV
NTKRSVGSSLLAGYLASVAPLDACVARAAAQRVAPAKDGSGAEDAADAEWLLLLAVPILA
WAAVSSAVERLIDQIPSNLDGAGTLEKLRLTDSTTLANAVFLPPATLARLTNLLPDAHTN
ALEHYGHVVTLIVMLLEQSARLRQDAAEALWRFVTQPDEPAAANPADSNQVIAVILHALQ
TFPVDMEAFPALLAALSTVGAGVNAASQYERVYDSICTMRGFAASMSARQLGVDYELDAA
SGACVLLRPQTFRLGELELQAAAGTQGTMTVTSEQQDVIVYWYIPYSGWFLLTELAGTVL
SQGEVSARLACNLTSIVASCCYHRDLSAELHDHLFHIYQTLGRPHQSSLLLDWALTKLDA
ASHLSPDMLGVAAHALRLLVYRATDDPLGVWQRCSEIRLISADEENIAMRILYNMERQMG
RFEATVQLIFLTQQVLVSLADCEEPNDTHTRASLVNMVKFLLLQVFSEAPHWQAASLENY
LGLIHALSTWLGAILSLETSNPTVRHVQKAIHRYLHDDARAAQALVHLLHMVAQLWQAPA
QHELSRNRQLVADMLESLLLVLSRLLRRASREAKPGAPLTKLEMQVTMPDQASARTASMS
QQLPDMAGSSSRHPLIAVAKLITVQNEEAIPMFAAQVFARMASVASRFASDGGSASSTNP
SHVSVSSILGNGVHELRYALLLRLESDSPTTLRIAIVQLIAELVHSQPSVGRLFLDVRRA
KAQGDDTSSSGGLVLGPNSCLPECISIVTEPSWIEEHPDLVAACLALALELITLETYSWR
DGLPKHLVQVFQALNKVPELPLQGKFETKAVAEATVLYVRTWINFVGICCEHEGSETVAE
PGPARPASLGRLTVPSNKAKPYVMNDTQYCKLVVKCLEQARFQAQAGCDAESSPSANSTM
QWFDAAHYHAQIAVALAETAALHLGRILQRSESIHKHVTIESVASMLLELSALLSITSSS
TATLSVVRFSALQALAQLMVALWPPVSKHAEPKAAASVLAECQRHFDALAVHVSEGLVHD
LVSLETPAVNDAPDASTYADNVGPAVVVLTWLVRESTSGVPLRHLYQSMLLERLLHLSDN
FMQVRQHANFVQHVLRLALTIVHLPNGLTALEYGQPVNEKGGLMYHLNSGTAAMWRDHAM
GAASLAPYLTRHASAVNPWFTVWRFSLQLVTAIVSMNSSQAVNLGLSFFTVHYERMLQGQ
SRLRQNQITLLELEELSDMMRLCAAFSWHTPQWVAAMPILLDDGRFIRGLAFLLDDLNVF
LSGSATKISSAFVAVSVSEEEDLHRASDRFFTPTPTAMSGEQAASTNMFYHSISHELIQV
MCNVAVTLTHLTFSSDQVRQAADLAAMVCYFDAGSRDTDTGSLSTLFIALDTLRAVSRRG
ARAVSAASPSGSPNRQVVGVGEDITELNVAMDHILLILITQVLHHCRHPSPSFDAKTVHY
RLKQTLNNISRLRGGAPPSPLGRATSPLASPPPTRDCMTATMFGDDHVILDATYELVRSL
SLATK
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacagtgggtgccggtgcttcggtacctgcaacaccaaagttggcgctcttc
aaggcgcaagctgatggtccggagaaggcttcccccctgcgccatgtggagggtccgaca
caggcagccggtgcaccaccaacctttttgcgcctgctgcgcatcttcgacactccaaaa
tttcagccatcgctcgtgtccaagactcatctcaaagagatgaccaatcttctggacttc
ttcaagcccgccagtgactcttcaaagcaagccttgcgccaggagcttttgcccagctct
ctgtctgctgactctgccgagcatgtcgtcaagaagagacgcttcgagtggatcgactct
ttggcgtatcttctgaacttgcaccacgagcaagctcgagctttagtcgagcagtacgtg
gccaactcccggccctcccaaggcacagagcatttggatcattacctcatgtccgaagat
cttgctgccaatcttcgagccaagcttgtcaagttttatttgaccactaggcagcgcgct
ctggagatggttggctttatccttgccaagagcgaagaatccgagtacggcaccctggcc
tccacgctcttggcacacaaccctcaagagccgagtgcactcttggtcaatttgacgcaa
cagtacctcaaaccatcactgcaacttcattttgcctcgttgttggcggcgcgcgaagac
cgtgccacaaagcgcgcggtatgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgcaggcagctgcaggtcagcacgcc
tacccggccgcaacgcgctgtgtctcgcgccaccaccaaagatgctgcacccgatttctc
acgaaaatctcagcaggatccaaaaaggatcaggcttcggctcaacttttgacagatcgg
cttgaggagttgttcatgcacgcctgcctggcagaagcacggttgcttctttccatcctc
tccttcgtcctcgcactgacggatatcacagagcgtgagatgaaactgatcgttcctctt
tttcaacagcagattttacgacaagaggccttgttttctgggacaacttggtggcagacc
aatcgagagcgctggcagtccaccgtgcgctccattcgcgtagagctcgtactcgtcatg
ctctcctgcatccaagctcatcaactagatgacattctgagtgatcttgcgagctgtgtc
aataccaagcgaagcgtcggctcttcactattggccggatatctcgccagcgtggctcca
ctggacgcctgcgtagctcgtgctgccgctcagcgcgtcgctccagccaaagacggctca
ggtgcagaggatgcagccgatgccgagtggctgctgcttttagccgtacccatcctcgcc
tgggcggcggtcagcagcgccgttgagcgattgattgaccaaattccttccaatttggat
ggtgctggtactctcgagaagcttcgcctgacggactcaaccaccctggcgaatgctgtc
tttctgcctcccgccaccctggcacgcctcacaaacttgctgccagatgcccataccaac
gcgctcgagcattatgggcacgtggtcacgctcattgtcatgctactggagcaatcggcc
cgccttcgccaagatgcagcagaggccttgtggcgctttgtcactcagcccgacgagcct
gctgccgcgaatccggctgacagcaaccaagtcattgccgtcattttacatgctcttcaa
acgttccccgttgacatggaagctttcccagcgttgttggcagcgctatccacggtgggg
gctggtgtcaatgcagcgtctcaatacgagcgcgtatatgacagcatctgtaccatgcgt
ggctttgccgcatccatgtcagcacgccagctgggggtggactatgagcttgacgcagct
tcgggcgcatgcgtccttctacgccctcagacttttcgactcggtgaactggagctgcaa
gcagcggccggcactcaaggcaccatgacagtgacttccgagcagcaagatgtcattgtt
tactggtacattccatacagtggctggttccttttgaccgaactggccggaacagtcctg
tcccaaggggaggtttccgcccgtttggcctgcaatttgacatcaattgtggctagttgc
tgctaccatcgggatctcagtgccgagctacacgatcacctctttcacatctatcaaacg
cttgggcggccccaccaatcctcgctcctactggactgggccttgaccaagcttgatgca
gccagtcatctttcccccgacatgcttggggtggctgctcatgctttacgcttgctcgtg
taccgtgccacggatgatcctttgggagtttggcagcgctgctcggaaatccgtctcatc
tcagctgacgaggaaaacattgccatgcgcattctgtacaacatggagcgtcaaatgggc
cgctttgaggccacagttcagctcatcttcctgacgcagcaggtgctggtctcacttgcc
gattgtgaggagccaaatgatacgcacacccgggcttcattggtgaacatggtcaagttt
ttgcttctccaagtgttttctgaagccccgcattggcaagcagccagcctcgaaaactat
ttggggctgatccatgctctcagcacctggcttggcgcgattttgagcttggaaacctcc
aacccgaccgtgcgccacgtgcaaaaagccattcatcgttacctccatgatgatgcacgc
gcagcgcaggctctagtgcatctcctccatatggttgcacaactctggcaggcacccgcc
cagcatgagctgtcgcggaatcgtcaattggtggccgatatgctcgagtccttgctgcta
gttctttcgcggttgttgcgtcgtgcgagtcgcgaagcaaaaccaggggctcctcttaca
aagctggagatgcaagttaccatgcctgatcaagcatctgcacgcactgcgtccatgtcg
cagcaactgccggatatggcaggatcgagcagccgtcatcctctgattgccgtggcaaag
ctcataacggttcaaaacgaggaggccattcctatgttcgcagcccaagtctttgctcgc
atggccagcgtcgccagccgatttgcaagtgatggtggctcagcttcgagcaccaaccct
tcacacgtttcagtcagcagcatcctaggcaacggcgtccatgagttgcgctatgctttg
cttttgcgtctcgagtcggatagtccaactacgctacgcattgccattgtacagttgatt
gcagagcttgtccactctcagccaagcgtgggacgcttgtttctggatgtgcgcagagcc
aaggcgcaaggggacgacacttccagtagtggtggtcttgttcttggacccaacagttgt
cttcccgagtgcatctccatcgtcactgagccgtcgtggatcgaggagcatcctgacttg
gtggcagcgtgtctggcgttggctttggagctcatcacgctcgagacatacagctggcga
gatgggctaccaaaacatctggtccaagtgttccaagctttgaacaaggtgcccgagctg
ccattgcaaggcaaatttgagacaaaggcggttgctgaggccactgtactctacgtccgc
acctggatcaactttgtgggcatttgttgcgagcacgagggcagcgagacagttgctgag
cctggaccagcgcggcccgcgtctctcggacgactcactgttccgagcaacaaagcaaaa
ccctacgtgatgaacgatacccagtattgcaaacttgttgtcaaatgcctcgagcaagca
cgtttccaggcccaagctggttgcgacgcagagagcagtccaagtgcaaacagcacaatg
caatggtttgacgcagcacattaccatgctcaaattgccgtggcattggcggagacggct
gcactgcatttgggacgtattcttcaacgcagcgagagtattcacaaacacgtgaccatt
gaaagcgttgcaagcatgttgcttgagttatctgctttgttgagcataacgagctcttcc
acggcaactttaagcgtagtacgcttcagtgcattacaggcgctggcacagcttatggtt
gcgctttggccgccggtgtccaagcatgccgagcccaaggcagcggccagcgtactggcc
gaatgccagcgtcactttgacgccttggccgtgcatgtctccgaaggccttgttcatgat
cttgtcagcttggagacgccggccgtcaacgacgccccggatgcttctacttacgcggac
aacgttggcccagctgtggtggtgttgacctggctcgtgcgtgagagcacttctggcgtc
ccactgcggcatttgtatcaatccatgctgctcgagcggctgttgcacttgtccgacaac
ttcatgcaagtccgccagcatgccaattttgtgcaacatgttttgcgtttggctctgaca
atcgttcacctgccgaatggtctgacggcactggagtacggccaacccgtcaacgagaaa
ggcggtttgatgtatcacttgaacagcggaactgctgccatgtggcgagatcacgccatg
ggggcagcttccttggccccatacctgacgcggcatgcctccgctgtcaacccatggttc
actgtctggcgcttcagtctccagctcgtgacggccatcgtgagcatgaactcctctcag
gccgtgaatctggggctctcctttttcacggtgcactatgagcgtatgctacaaggccaa
tctcggctgcgccaaaaccagatcaccttgctagagcttgaggaattgtccgacatgatg
cgactttgtgcggcattttcgtggcatactccacaatgggtagctgccatgcccattctt
cttgatgatggccgcttcattcgtgggcttgcgttcttgttggacgatctcaatgtgttt
ttgagcggatcggcgaccaagatcagcagtgcctttgttgctgtctctgtttcggaggaa
gaggatttgcaccgggccagtgacaggtttttcacacccacgccaactgccatgagcggt
gaacaagcggcctccacaaacatgttctaccatagcatctctcatgaactgattcaggtc
atgtgcaacgtggccgtgacactgacccatctcacgttttcatcagaccaagtgcggcag
gcagccgaccttgcggccatggtgtgctactttgatgccggaagccgggacacagatacg
ggcagcctgagcacgctattcattgctctggacacattgcgcgccgtatcgcgccgtggg
gctcgggcggtgtcagctgcatcaccatcgggctcgcccaatcgccaagtcgttggcgtt
ggcgaggacatcactgagttgaacgtagccatggatcatattctactgatcctcatcaca
caggtgcttcaccattgccgacacccatcaccaagctttgatgccaagactgtgcattat
cgtctgaagcagaccctgaacaacatttccagattacgcggtggagcacccccatctccc
ttgggacgtgcgacttcaccattggcttcgccaccaccaacgcgcgattgcatgactgca
acaatgtttggcgacgaccatgtgattttggatgccacctacgagttggtgaggtcatta
tcattggccacaaagtga
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