KEGG   Monosiga brevicollis: MONBRDRAFT_27789
Entry
MONBRDRAFT_27789  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
mbr  Monosiga brevicollis
Pathway
mbr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MONBRDRAFT_27789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_27789
   03036 Chromosome and associated proteins [BR:mbr03036]
    MONBRDRAFT_27789
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MONBRDRAFT_27789
   Coactivators
    SAGA/TFTC/STAGA complex
     MONBRDRAFT_27789
Chromosome and associated proteins [BR:mbr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     MONBRDRAFT_27789
    STAGA complex
     MONBRDRAFT_27789
    TFTC complex
     MONBRDRAFT_27789
    SAGA complex
     MONBRDRAFT_27789
    SLIK complex
     MONBRDRAFT_27789
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 LisH LisH_TPL Beta-prop_RIG_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 5893452
NCBI-ProteinID: XP_001748278
JGI: 27789
UniProt: A9V6B7
LinkDB
AA seq 728 aa
SCKLSLSLSLFFFLRERERERERERERERERERERERERERGDGDFGTFGQRAGGVSADG
SELDRIVYAYLKKRNYHKTLADLQSESKVSQLDKALDGDIDDPESLVATRLASYASETTP
QQLIASYESLATWADATLDQYRTELRQLLFPLFVLCFCDLMNRGQEKHAVAFVERFYRDH
ADEHPSHVQQLRVITNLEQLRRNDLIRLYVNNKYDIVLSQFAINLFVNFVKDNAFMALLR
LTNQFIRLKQARGDPINDQSGLRIDSDKMEINETPVHWGTFPYIDAAAEEASETTAGDEA
GAENKPAKRAKQVADENAPPQDQRLVFPPMGREEIEARLEALKLASEAAQAPDTLPSTCM
YTTFHSRNVTHMAFSMDGKLLATGQDDSIITVWSLTQHDLYDFLPPETMRKVQIDESTSL
NDFLDRESGTKTRSLVGHSGPIYGLSFSPDQMYLLSSSQDSTIRLWSLLTWSCLVVYRGH
QYPVWDVQFSPLGYYFASASHDRTARLWNTEKIFALRILSGHLSDVNCVKFHPNCNYLAT
GSADKSCRLWDLPTGNCVRIFRGHMQVCSRLANTKQNKANPSLDEVHTLEFSNNGRFLAS
AADDWVIMIWDIKTSTRIANFCGHRKNIYSLSFSMNDMMLVSGGADNTVRVWDCKALKAA
YESMAEVRAATEPVKPGRASGALLKTYYTKATPVYALKFAPANYVISAGVYNHAEAQPAP
VPATTKKA
NT seq 2187 nt   +upstreamnt  +downstreamnt
agctgcaagttgtctctctctctctctcttttttttttcttgagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagagagagagagag
cgcggcgatggcgacttcggcacctttgggcagcgggccggcggcgtcagtgccgacggg
agtgaactggatcgtatcgtttatgcgtacctcaaaaagcgcaattatcacaaaacgttg
gcggatttgcaatccgagtcaaaggtgtcacagctcgacaaggcgctcgatggtgacatt
gatgaccccgagtcgttggtggccactcgcctcgcgtcctacgccagcgaaaccacgccc
cagcagctcattgcctcctatgaaagccttgccacttgggccgatgccacgcttgatcag
tacagaaccgagctgcgccagctgctcttccccctctttgtcctctgcttttgcgatctc
atgaatcgcggccaagagaagcacgccgtggcatttgtggagcgcttctaccgcgatcat
gccgatgaacatccctcacacgttcaacaactgcgtgtcatcaccaacctcgagcagctt
cgtcgcaacgacctgattcgcctctacgtgaataacaaatacgacattgttctctcacaa
tttgccatcaatctctttgtcaactttgtcaaagacaacgcgttcatggcgctccttcgt
ctcacgaaccagtttatccgtctcaaacaggcccgaggcgatcccatcaatgatcagagt
ggcctgcgcatcgacagtgacaagatggaaatcaacgaaacgcccgtccattggggtacc
tttccttatatcgacgcagccgccgaggaagccagcgaaaccactgcaggcgatgaagcc
ggcgctgaaaacaagccagccaaacgtgccaagcaggttgcagacgagaatgcaccgcct
caagaccagcgcctggtcttcccgcccatggggcgcgaagagattgaggcacgactcgag
gcactaaagctggcaagtgaagcagcgcaagctcccgataccctgccctcaacatgcatg
tacaccacgtttcactctcgcaatgtcacccatatggccttttccatggatggcaagttg
ctggcaacgggtcaggatgacagcattatcactgtctggtcccttactcagcatgaccta
tacgactttttgccgcccgagaccatgcgcaaggttcagatcgatgaatcgacctcgctg
aacgactttttggaccgcgagtcgggcaccaagactagatcgttggtgggccacagcggg
ccaatttatgggctctccttctcgccggaccaaatgtacctactgtccagctcccaggat
agcacaatccgcctgtggtccctcttgacttggtcatgcctggtggtttaccgtggccac
cagtatcccgtctgggatgttcagtttagtcccctgggctactattttgcctcggcatcc
cacgatcgcacggctcgcttgtggaatacggagaaaatcttcgcgctacgcattctctcc
ggacatctctctgacgtcaattgtgtcaaatttcaccccaactgcaactacctggccacc
ggctcggccgacaaatcgtgtcgcttgtgggacctgccaacgggcaattgcgtccgcatt
ttccgtggacacatgcaagtctgctctcgtcttgcaaatacaaaacaaaacaaagcgaat
ccctctttggatgaggtgcacacgctcgagtttagcaacaatggtcgtttcctggcatca
gccgcggatgactgggtgattatgatttgggacatcaaaacgagtacgcgcattgccaac
ttttgtggccatcgcaagaacatctacagcctgtcctttagtatgaatgatatgatgttg
gtctcgggtggtgcggataacacggtgcgggtgtgggattgcaaggccctcaaggcagcc
tacgagtctatggcagaggtgcgcgcagccactgagcccgtcaagcctggccgtgcgtca
ggggcgttgctcaagacctactacaccaaggccacccccgtctatgcgctcaagtttgca
ccagccaactatgttatctcggccggggtatacaaccacgctgaggcacagccagcgcca
gtgccagctaccacaaaaaaggcgtga

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