Monosiga brevicollis: MONBRDRAFT_28344
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Entry
MONBRDRAFT_28344 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mbr
Monosiga brevicollis
Pathway
mbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MONBRDRAFT_28344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_28344
03041 Spliceosome [BR:
mbr03041
]
MONBRDRAFT_28344
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MONBRDRAFT_28344
Spliceosome [BR:
mbr03041
]
Complex B
Other components
Prp19-related factors
MONBRDRAFT_28344
Complex C
MONBRDRAFT_28344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
TPR_2
Mad3_BUB1_I
TPR_12
NRDE-2
UTP6_C
DUF4798
TPR_10
Motif
Other DBs
NCBI-GeneID:
5894098
NCBI-ProteinID:
XP_001748766
JGI:
28344
UniProt:
A9V7W6
LinkDB
All DBs
AA seq
926 aa
AA seq
DB search
MVATTTTTAVDATASASASAEAAAAAAAAAAVKASAENISAANLLLESKKKKKKKKTRAF
KLPRAGDAPVKDWLAYLERKKSASPAVRFSLFERAVRQLPGSFKLWVRYLRERKALVATV
APTDPARRATYDTFRRAMVFMHKMPRIWIEYLELMMESGLITETRRTFDECLRALPITQH
HRIWPLYLKFVRQPHIPTETACRVYRRYLMIEPNDAEEFVDYLVSAKRYEEAAAILIEVL
NKEKYVSKQGKSHHQLWLELCQLVSEHPDGVRNIKVEPIIRGGLRKFSDMIGQLWCALAA
YHIRRGSFEKARDIYEEAIQTVQTVRDFSQVFEAYAEFEEQSLTALMEQMGEEGLDGNEE
VEWRMARYEQLMERRPLLLSSVLLRQNPHNVDEWHKRVALFSSQPSEMILTYRDAVKTVD
PSKATGKVHTLWVEFARLYEATSLEEARKVYERGVQEPFRKVDDLAELWCQYAEMELRHK
NFQRAVNVLRRATAMPSKKQLVDESGRPSVQARVHKSLKLWSMYADLEESIGTLEGTKAV
YNRMLELRVATPQVIINFATFLEENKYFEEAFTAYERGVALFKWPIVFEIWNTYLAKFIK
RYVSQLHLVQALTQQQSCPLIIYSARPYLCLLGLTQFVRTPLVSRFKIGQGGDKLERTRE
LFEQCLENIPAKFAKVIYLMYADFEEKYGLGRHAMAVYQRATQKVPSEDRFEMWQLYIKR
AAALFGVVYTRELFVAALEDTLLSDKDMQAMAMDFASLETKLGEVDRARAIYSHTSQYCE
PKSAKKFWDAWEDFEVRHGNEDTYREMLRIKRSVAAQSNTSSNVNVFRAAEEAARALRDG
GNAMAAAESEAAARAAPQQTAFVKAGGAPAGNRDEIDLDDDDDDDEEEDGNATETATNNV
DIEEKAVPDEVFGGIGAKALLSQKSA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgacgaccaccacaacggcagtcgatgccactgcctcggcgtcggcgtcggca
gaggcagcggcagcggcggcggcagcggcggcggtgaaggcttcggcagagaacatcagt
gcagccaatctgttgctcgagtcaaagaaaaagaaaaagaaaaagaagacaagagcattc
aaacttccgcgcgcgggagatgcgccagtcaaagactggctcgcctacctcgagcgaaaa
aagtctgcctctcccgccgttcgcttctcgctctttgagcgcgctgtgcgccagctgccc
ggcagcttcaagctctgggtgcgctatctgcgtgagcgtaaggccctggtcgctaccgtg
gctcccaccgacccagcacgccgagctacctacgacactttccgccgcgccatggttttc
atgcacaagatgccgcgcatctggatcgagtacctcgaactcatgatggagtcgggcctc
atcacggaaacgcgtcgcacctttgacgaatgtcttcgagctttgcccatcactcaacac
caccgcatctggcccctctacctcaagtttgtgcgacaacctcacattcccaccgagact
gcgtgccgcgtgtatcgccgctacctcatgattgagccaaatgacgccgaggagtttgtc
gactatctcgtctccgccaagcgctacgaagaggctgctgccattttgattgaggtgctc
aacaaggagaaatacgtgagcaagcagggtaaatcacaccaccagctctggctggagctc
tgtcagctcgtcagtgagcaccccgatggtgttcgcaacatcaaggtcgagccaatcatt
cgcggtggcttgcgcaagttctcagacatgattggccagttgtggtgcgcgctggcggcg
tatcatatccgccgtggcagcttcgagaaggcccgggacatctacgaagaggctattcag
accgtgcagaccgtgcgcgatttcagtcaggtcttcgaagcctatgctgaattcgaggag
cagtctctcactgccctcatggagcaaatgggcgaagagggtcttgatggtaacgaggag
gtcgagtggcgcatggcgcgctacgaacagctcatggagcgccgacccctgttgctgagc
agtgttctgctgcgccaaaacccccacaatgtggacgagtggcacaagcgcgttgccctc
ttctccagtcagccctccgaaatgatcctgacgtatcgcgatgccgtcaagacggtcgat
cccagcaaggccactggcaaggtgcacacgctgtgggtcgagtttgcccgcctgtacgag
gccacttcgcttgaggaggcgcgcaaggtgtacgagcggggtgttcaggagccctttcgc
aaagtcgacgatttggcagagctgtggtgtcagtatgccgagatggagctgcgccacaag
aattttcagcgtgctgtcaatgtccttcgtcgagcaacagcaatgccgtccaagaagcag
ctggtggatgagtctggtcgaccctcggtccaggctcgtgtgcacaagagcttgaagctg
tggtcaatgtatgccgaccttgaggagtctatcggcacactcgagggcaccaaagccgtg
tacaaccgcatgctcgagctccgcgtggccacaccacaggttatcatcaactttgcaacc
tttttggaagaaaacaaatactttgaggaggcgttcacggcctacgagcgcggcgtagcc
ctcttcaagtggcccatcgtttttgaaatctggaacacctatcttgccaagttcatcaag
cgctacgtgagtcaactccaccttgtccaggccttgacgcaacaacaatcgtgccccctc
atcatatacagcgccagaccatacctctgtctgcttggactcactcaatttgttcgtacc
cccctggtatcccgtttcaaaattggtcagggcggcgataagctcgagcgcactcgtgaa
ctttttgagcaatgccttgagaatattcctgccaaatttgccaaggtcatctatctcatg
tatgcagactttgaggagaaatatggattgggccgtcatgcaatggccgtgtatcagcga
gctacacaaaaggtccccagcgaggaccgcttcgagatgtggcagctgtacatcaagcgt
gctgcggccctttttggcgtggtctacacccgcgagcttttcgttgccgcgcttgaagac
actcttttgtctgacaaggacatgcaagccatggccatggactttgcttctctggagacc
aagctcggcgaggtggatcgcgcacgcgccatttactcacacacttcacagtactgtgag
cccaagtccgccaagaagttttgggacgcttgggaagactttgaggtccgccacggaaat
gaggacacctaccgcgaaatgctgcgcatcaagcgctcggtcgccgctcagagcaacacg
tcttccaacgtcaacgtgtttcgtgcagcggaggaggctgcccgtgccttgcgggatggt
ggcaacgcgatggcggccgccgaatcggaagcagctgcccgtgctgctccccagcaaacg
gcctttgtcaaggctggtggtgcgccggcgggcaaccgtgacgagatcgaccttgacgac
gacgacgacgacgacgaagaagaagatggaaatgcaaccgagactgctaccaataatgtc
gacattgaggagaaggctgtgcccgacgaggtttttggtggcatcggcgccaaagctctg
ttgagtcaaaagtcggcctaa
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