KEGG   Monosiga brevicollis: MONBRDRAFT_29746
Entry
MONBRDRAFT_29746  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_29746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_29746
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MONBRDRAFT_29746
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MONBRDRAFT_29746
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 5895491
NCBI-ProteinID: XP_001750235
JGI: 29746
UniProt: A9VC03
LinkDB
AA seq 204 aa
MAAAELLCGGVDQVVLPGTRLAKADDYAAGEGTYVRHDRVCASLRGTVVIHTPEPSEDED
AAKVKAVLRVVRGGAVPSLMPSVGSTVTCKVTSINTQQARVVILCVDGKPVATRFSGIIR
IQDIRALEKDKVEMHSSFRPNDVVLARVISLGDARSYYLSTAEDALGVIAARSEAGAPLI
PTSWCEMTCQQSGLKELRKVAKTV
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcggcggctgaacttttgtgtggtggggtggaccaggtggtgctgccggggacccgg
ttggccaaggctgatgactacgcggcaggcgaagggacctatgttcgtcacgaccgcgtc
tgtgccagcctgcgtggaacagtggttattcatacgcccgagcccagcgaggacgaggat
gccgccaaggtcaaggccgtgctgcgggtcgtgcgtggcggcgctgtcccctcgctcatg
ccgtccgtcggctcgaccgtcacctgcaaggttaccagcattaatacgcaacaggcccgc
gttgtaatcctctgcgttgacggcaagcctgtcgccacacgcttcagcggcatcatcagg
atacaagacattcgggcgctcgagaaggacaaggttgaaatgcatagctctttccgaccc
aacgacgtggtgttggcgcgcgtgatttccctgggtgatgcgcgtagttattatctttca
acggcagaagatgctttgggcgtgattgctgcccgcagtgaagccggtgcaccgctcatc
cccacgagctggtgtgaaatgacgtgccaacagtctggactcaaggagctgcgcaaagtc
gccaagacggtatag

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