KEGG   Monosiga brevicollis: MONBRDRAFT_30048
Entry
MONBRDRAFT_30048  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
mbr  Monosiga brevicollis
Pathway
mbr03020  RNA polymerase
mbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MONBRDRAFT_30048
  09124 Replication and repair
   03420 Nucleotide excision repair
    MONBRDRAFT_30048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_30048
   03400 DNA repair and recombination proteins [BR:mbr03400]
    MONBRDRAFT_30048
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MONBRDRAFT_30048
  RNA polymerase III system
   RNA polymerase III
     MONBRDRAFT_30048
  RNA polymerase I system
   RNA polymerase I
     MONBRDRAFT_30048
DNA repair and recombination proteins [BR:mbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MONBRDRAFT_30048
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 5895808
NCBI-ProteinID: XP_001750538
JGI: 30048
UniProt: A9VCV6
LinkDB
AA seq 137 aa
MASTVLFEDVFTVRDKDPHGKRFDRVSRVICEGMSFNIELILDLNTQLYPVDLNDRFTLC
LASTLSMDDEPDDGYYNQNRNASRADNFDYVMHGTIYRIEDTDNGQQLYVESSASVSICM
LPPCLAPCFLALQAQCR
NT seq 414 nt   +upstreamnt  +downstreamnt
atggcttccaccgtcttgttcgaggacgtctttaccgtccgcgataaggatccccatggc
aagcgcttcgaccgcgtctcccgcgtcatctgcgagggtatgagcttcaacattgagctg
atcctggacctcaacactcagctataccccgtcgacctgaacgaccgctttactctctgc
ctcgcctctaccctgagcatggacgatgagcccgacgatggctactacaaccagaaccgc
aacgccagccgagctgacaactttgactatgtcatgcacggcaccatttatcgcattgag
gacacggacaacggccagcagctgtacgtggagtcttccgcctcagtatcgatctgcatg
ctccctccctgcctcgccccttgtttcctcgccttgcaggcacaatgccgctga

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