KEGG   Monosiga brevicollis: MONBRDRAFT_31260
Entry
MONBRDRAFT_31260  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mbr  Monosiga brevicollis
Pathway
mbr03020  RNA polymerase
mbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MONBRDRAFT_31260
  09124 Replication and repair
   03420 Nucleotide excision repair
    MONBRDRAFT_31260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_31260
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_31260
   03400 DNA repair and recombination proteins [BR:mbr03400]
    MONBRDRAFT_31260
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     MONBRDRAFT_31260
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MONBRDRAFT_31260
DNA repair and recombination proteins [BR:mbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MONBRDRAFT_31260
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 5888773
NCBI-ProteinID: XP_001743103
JGI: 31260
UniProt: A9USP9
LinkDB
AA seq 174 aa
MFFTETLTHDVLLHPRFLDQNLEAILKTQLYSEVECKVHRSHGYVLAVIKIDRISEGRIL
FNRGEILFNVTYTAVILRPVPKQVIDTMVTSVNNRGIFVSIGPLTAFVSNSWIPDMTFDS
DANPPRYISAKDGITIEPNDGVRVKIIAVRIAAQDIFITASLTGDYLGPSDARV
NT seq 525 nt   +upstreamnt  +downstreamnt
atgtttttcacggaaacattgacgcacgatgtgctcctgcatccgcgattcctggaccaa
aaccttgaggccatcctcaaaacccaactctacagcgaagtcgagtgcaaagtgcatcgc
agtcatggctacgtgctggccgtcatcaagattgatcgcatctcagagggccgaattctg
ttcaaccgcggcgagattcttttcaacgtcacatacaccgccgtcattttgcggcccgtg
cccaaacaagtcattgataccatggtgacaagtgtcaacaaccggggcattttcgtttcc
attggtcccttgaccgcatttgtgtcaaacagctggatccctgacatgacgtttgattct
gatgcgaatccccctcgctacatctccgccaaagacgggatcacaatcgaaccaaacgac
ggagtgcgtgtcaagattattgctgtgcgcattgctgcacaagacatttttatcaccgcc
tccctgacgggtgactatctgggcccctctgatgcacgagtatag

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