Monosiga brevicollis: MONBRDRAFT_32429
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Entry
MONBRDRAFT_32429 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mbr
Monosiga brevicollis
Pathway
mbr03018
RNA degradation
mbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MONBRDRAFT_32429
09123 Folding, sorting and degradation
03018 RNA degradation
MONBRDRAFT_32429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_32429
03041 Spliceosome [BR:
mbr03041
]
MONBRDRAFT_32429
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MONBRDRAFT_32429
mRNA degradation factors
5'-3' decay
Lsm complex
MONBRDRAFT_32429
Spliceosome [BR:
mbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MONBRDRAFT_32429
Complex C
U2 snRNP components
MONBRDRAFT_32429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
DUF150_C
Motif
Other DBs
NCBI-GeneID:
5891217
NCBI-ProteinID:
XP_001745941
JGI:
32429
UniProt:
A9UZG8
LinkDB
All DBs
AA seq
96 aa
AA seq
DB search
MLFSSFFKTLIGKEVTVELKNDLQLNGVLKSVDQFLNIKLDSIQVADIERYPHMMAVKNC
FIRGSVVRYIHLPPEHVDKQLLQDATRKEATGGDKN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagctctttcttcaaaacgctcatcggcaaggaggtgacggtcgagctgaaa
aatgacctgcagctgaatggcgtcctcaagtcggtggatcagtttctcaacatcaaactc
gacagcattcaggtcgccgacattgagcgctacccacacatgatggctgtcaaaaattgc
tttatccgtggttcagtcgtgcgctacatccacttgccccctgagcatgtcgataagcag
ctcctgcaggacgcgactcgcaaggaggcgacgggaggagacaagaactag
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