Monosiga brevicollis: MONBRDRAFT_33160
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Entry
MONBRDRAFT_33160 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mbr
Monosiga brevicollis
Pathway
mbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MONBRDRAFT_33160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_33160
03012 Translation factors [BR:
mbr03012
]
MONBRDRAFT_33160
Enzymes [BR:
mbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MONBRDRAFT_33160
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MONBRDRAFT_33160
Translation factors [BR:
mbr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
MONBRDRAFT_33160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
AAA_19
AAA_16
nSTAND3
ATPase
PhoH
Cas3-like_C_2
NACHT
Rad17
T2SSE
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
5892596
NCBI-ProteinID:
XP_001747335
JGI:
33160
UniProt:
A9V410
LinkDB
All DBs
AA seq
1060 aa
AA seq
DB search
MSEGSSYSYVDYSQGGGFGGGYGGFGGTSNSGYGSAAYGGADRRGPGASDEYAGSHYEHG
GHRGRGRGRGRGRGRGRGGGGYQDGGRGRGGGGRGRGGSGRGGGGGGGGGGGGPPAGLSG
RDIGMWYARQGQAARKQQERRERPIVSFDSHKHRDIQQLLSSARVQVPQNASVTADEAAL
GALSGTSFKRNVDNLTEASLVQDREAKRAKEQSDSSLAAFRQKLPAWKQQADVIDAIRSH
QVVIVTGETGCGKTTQVPQFVLDDALDRGEGMNVQMVCTQPRRISATSVAQRVARERNES
CGGSSSSTGYQIRLDARLPRSHGSITFCTVGILLRRLINDSSLQDISHIILDEVHERDIL
TDFLLVIIKDILPKRPSLKVILMSATLNAETFSSYFPGSTTLHIPGFTYPVEELYLADVL
DEIRYRLPPPRDSFGGGRGGRGRGFGGRGRGRGRGGRGRGRGGFRHEEEGGIGDEAQATA
EELQQQAAYQAYVSSLAASGYSHQTIEGLRRRPIDETEAMIDYDLVTAVIWHICRNKPDG
AILCFMPGWTDIQKVYETLKSSGPTANRQKYRVLPLHSMLPTAQQQQIFDRPPAGVRKIV
IATNIAETSITIDDVVYVIDTGLGKEKTYDEVSHLSELKATWVSKASSRQRKGRAGRVQD
GVCYHLFTRFRLAQMEDNQLPELLRTPLEELILQIKILKLGQASDFLQRAIDQPSPQAVE
NALKALRQLHALDKEENLLPLGHHLAQLPVAPKIGRMLVFAAMLQCLKPISVIAASLSFK
DPFSAPIDKQKVMDQRRRAMAPEAMSDHITLLRAYQGWEEELRHGGAREYCWDNFLSSST
LNMIRDMAGQLMDLLRDIGFISAEVDFNRHADNTQLIKAVLAAGLYPNVISVQHPHGRKF
GERPPKLFTQEDGRVTLHPKSVLAEETVFETKWLVYHLKMRTTSLFVYDATMVQPLALLF
FGGEISTGMEDGEEIIQVDDFITFRSPARTADLVRDLRDQVDHILQKRIRNPSSRFDERE
ARILAAIIDLITHEEVDRQRFMDGRKQYTRRDPDWRLEQP
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggttcgagctacagctacgtcgactacagccaaggtggaggcttcggcggc
ggttatggcggctttggaggcaccagcaacagtggttatggatcagcggcctatggggga
gcggatcgtcgggggccaggggcctctgacgagtatgcaggttcccactacgagcatgga
ggccatcgcggacgtggccgcggccgaggccgtggacgaggccgtggacgaggcggcggt
ggttatcaagacggtggccgcggccgcggtggtggtggacgtggtcgtggtggtagtggc
cgcggcggcggtggcggtggcggtggcggtggcggcgggcctcccgcaggtctatcgggg
cgtgacatcggcatgtggtacgcacgtcaaggccaggctgctcgcaaacagcaagagcga
cgcgagcgccccatcgttagcttcgattcccacaagcatcgtgatatccagcagctgctc
tcctcagcccgcgtacaggttccacaaaacgcatcagtcacagcagatgaggctgctctt
ggagctttgagcgggaccagcttcaagcgcaacgttgataatttgaccgaggccagccta
gtgcaagaccgcgaagcgaagcgtgccaaggagcagtctgatagcagcctggcagccttt
cgccaaaaactgccggcctggaaacaacaagctgacgtcattgatgccatccgctctcat
caagtcgtcatcgttaccggtgaaacgggttgtggcaagaccacgcaggtcccacagttt
gtgctggacgatgcgctggatcggggcgaaggcatgaatgtgcaaatggtttgcacacag
ccacgccgcatcagtgccacttccgtagcccagcgcgtcgctcgcgagcgcaacgagtct
tgtggtggctcgtctagctccacaggttatcaaatccgcctggatgcacgcctgccgcgc
tctcatggttccattaccttttgcaccgttggcattttgcttcgccgcctcatcaatgac
agtagcctgcaagacatcagccatattatcttggatgaggtgcatgagcgagacatcttg
accgactttctcttggtcatcatcaaggacatcttgcccaagcgcccatcgctcaaggtc
attctgatgtcggccactctgaatgctgagaccttctcctcatactttcccggttctacg
accctacacatccctggctttacctaccctgttgaagaactctacctggccgacgtgttg
gatgagattcgttatcgcctcccaccaccgcgcgattcgtttggtgggggtcgaggcggc
cgaggtcgtggttttggcggccggggccgaggtcggggtcgaggaggccgaggccgaggc
cgcggtggctttcgccatgaggaggaaggtggtatcggggatgaggcgcaggccacagcc
gaggagctgcagcaacaggcagcataccaagcctatgtcagctcgctggctgccagcgga
tattcccaccagacgatagaaggtttgcgccggcggcctattgatgagactgaagccatg
atcgattacgatcttgttacagcagtgatttggcacatttgtcgcaacaagcccgatggt
gccattctctgcttcatgcctggctggactgatattcagaaggtctatgagactctgaag
agcagtgggcccaccgccaatcgtcagaagtaccgtgttttgccgcttcactccatgttg
cctacagcccagcagcagcagattttcgaccggccgccggcaggcgtgcgcaagattgtg
atcgccaccaatattgctgagactagcatcacgatcgatgacgttgtttacgtcattgac
acgggtctcggcaaggaaaagacttatgatgaagtcagtcacctctccgaactcaaggca
acttgggtcagcaaggcatcatctcgccagcgaaagggacgcgccggtcgtgttcaggat
ggtgtgtgctatcacctgtttacccggttccgcttggcacaaatggaggacaatcagctg
cccgagctgttgcgcacacctctcgaggaacttattttacagattaagattctcaaactt
ggtcaagccagcgatttcttgcagcgtgccatcgatcagccctcgccacaagccgtggaa
aacgctttgaaagcactgcgccagcttcatgcccttgacaaggaggaaaacctgcttccg
ttgggacatcatttggcgcagcttcccgtggcacccaagatcggtcgaatgctggtgttt
gcagccatgctgcagtgtctgaaacccatctctgtcattgcggcgagcttgagcttcaag
gacccattctcagctcccatcgacaagcaaaaggtcatggatcaacgccgccgcgccatg
gcaccggaggcgatgagcgaccatattacgcttttgcgtgcataccaaggctgggaggaa
gagctgcgacatggcggggctcgcgagtactgctgggacaactttttatcgagttcaacg
ttgaacatgatccgggatatggccgggcagctcatggatttgctgcgtgacattggtttc
atctcggctgaagtggactttaaccgacatgctgacaacacacagctcatcaaggctgtg
ttggcagccggcctgtatcccaacgtcatctccgttcagcacccgcacgggcggaagttt
ggtgaacgtccccccaagctgtttacacaggaggatggacgcgtcacgctgcatcccaaa
tctgttttggccgaggagacggtgtttgagaccaagtggttggtgtatcaccttaaaatg
cgcacgacctcgttgtttgtgtacgacgcgaccatggttcagccgttggccctgctgttt
tttggaggcgagatttcgacgggcatggaggacggcgaggagattatccaagtcgatgac
tttattacttttcgatcacccgcgcggacagcagacctggtgcgcgacctacgagaccag
gttgaccatattttgcagaagcggattcgcaacccatcgtcgcggttcgacgagcgcgag
gcacgcatcttggcagccattatcgacctgatcacccacgaagaagtggatcgccaacgg
ttcatggatgggcgcaagcagtacacgcgacgagatcccgactggcgtcttgagcagcca
tag
DBGET
integrated database retrieval system
