Monosiga brevicollis: MONBRDRAFT_33585
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Entry
MONBRDRAFT_33585 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
mbr
Monosiga brevicollis
Pathway
mbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MONBRDRAFT_33585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_33585
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MONBRDRAFT_33585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_19
TPR_16
ANAPC3
TPR_1
TPR_4
Motif
Other DBs
NCBI-GeneID:
5893412
NCBI-ProteinID:
XP_001748266
JGI:
33585
UniProt:
A9V686
LinkDB
All DBs
AA seq
593 aa
AA seq
DB search
MLLIDILIQQGQPEQARQALAQLEAALRPNDGDESATSKGNTSSGPETTDAGTDLATGTV
DQDLEALHNKLSQLRARLHLLTRNMKACKREIKATLNSQTKNITALVLRASYEYLRGNCR
KAIKLLNSWPVKDLEAARLDELGITYYNNMGCVHLKMGKPSLAHLYFAQSQDAHRQRQAA
NPPLQPHEDHRAELVFNEGLALFQLHQYMAAHERFTMVTPWRASSPHHWVRLAECCIHAC
CEATRARAAPTGNTMVGAADHRKLLHQPFEPARLAEASDELSLDNAASHLTWALHLATEL
QNSLANKDEPKMPAAYTLGTLQGPLDAGELTRLILHGQLEIEREGVCLLSLSLSLSLSLS
LSLSLSLSLSLSLSLSLSLSLPLPLSLSLSLSLSLSLSLSLCVPRYACNDFIHIHMLLAF
VAVEAGNYMDAVSHGRQVLEADGASSAVKAHAHLYMAQALAQADRLEEALAHVDPERLGA
LHAESTKLAADEHDDDGGDTAAHATGSQEQAYTVQSEFPAQALLSLAAVHCRQQAYTTAL
TCVQKAMAQITTPATLNHAVGLLVHCHLALDKPDEALRVARHHLMGGEPVIYP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgatcgacattctcattcaacagggccagccggaacaagcacgacaggctctg
gcccaacttgaagccgcactacgtcccaacgacggtgatgaatctgcgacgagcaaaggc
aacacctcctctggacccgagacaactgatgcgggcactgaccttgccacgggcactgtg
gaccaggacttggaggcactgcataacaaactctcccagctccgcgcacgcctgcacctc
ttgacccgcaacatgaaagcgtgtaaacgtgagatcaaggcaaccctgaacagtcagacc
aagaacatcacggccctggtcttgcgggcctcgtacgaatatctgcgaggcaattgccgc
aaagccatcaaattgctcaactcgtggcccgttaaagatctggaggcggcgcgtcttgat
gagcttggcatcacgtattacaacaacatgggttgtgtccacctcaagatgggcaagcct
tcgttggcacacctatattttgcacagagtcaggacgcgcaccggcaacggcaagcagca
aacccacctctccaaccacacgaagaccatcgcgctgaactcgtttttaacgaaggactt
gccctcttccagctgcatcaatatatggctgctcacgagcgctttaccatggtaacgccg
tggcgtgcctcatcccctcaccactgggtgcggttggctgaatgttgtatccatgcctgc
tgtgaggccacacgtgcaagggctgcgcccacgggtaacacaatggtgggtgctgctgat
caccgcaagctcctccaccagccttttgagccagcacgtctggctgaagcatcagacgag
ctgtcgctagacaatgccgccagccacctcacttgggcgctgcacctggccactgagctc
cagaatagtttggcaaacaaagatgagccgaaaatgccggcagcgtatactttaggcaca
ctacaagggcctttggatgcgggcgagctgacccgactcattctccatgggcagctagag
atagagcgagagggagtgtgtctcttatctctgtctctgtctctgtctctgtctctgtct
ctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtct
ctgcctctgcctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtct
ctgtgtgtgcctcggtatgcatgcaacgatttcatccacatccacatgctcttggccttt
gtggcagtggaggctggcaactacatggatgccgtgtcacatggtcggcaagtgctcgag
gcggatggtgcttcaagcgccgtaaaagcccatgcccatctctacatggctcaagctcta
gcgcaagcagatcggctagaggaggctcttgcacacgtggatccggaaaggcttggtgcg
ttgcacgcggaatccacgaaattggctgccgatgagcacgatgatgacggtggcgacacc
gctgctcatgcgacgggcagccaggagcaagcgtacactgtccaatcagagttcccggcc
caagctctccttagcctggcggccgttcactgccggcaacaggcctacacgacagcgctg
acgtgcgtacaaaaggccatggcccaaatcaccacaccagccactctgaaccacgccgtc
ggcttgctggtgcattgccatttggcccttgacaagcctgatgaggccctgcgtgtggcc
cgccaccatctgatgggtggtgaaccagtcatttacccctga
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