KEGG   Monosiga brevicollis: MONBRDRAFT_33585
Entry
MONBRDRAFT_33585  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_33585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_33585
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MONBRDRAFT_33585
SSDB
Motif
Pfam: TPR_12 TPR_19 TPR_16 ANAPC3 TPR_1 TPR_4
Other DBs
NCBI-GeneID: 5893412
NCBI-ProteinID: XP_001748266
JGI: 33585
UniProt: A9V686
LinkDB
AA seq 593 aa
MLLIDILIQQGQPEQARQALAQLEAALRPNDGDESATSKGNTSSGPETTDAGTDLATGTV
DQDLEALHNKLSQLRARLHLLTRNMKACKREIKATLNSQTKNITALVLRASYEYLRGNCR
KAIKLLNSWPVKDLEAARLDELGITYYNNMGCVHLKMGKPSLAHLYFAQSQDAHRQRQAA
NPPLQPHEDHRAELVFNEGLALFQLHQYMAAHERFTMVTPWRASSPHHWVRLAECCIHAC
CEATRARAAPTGNTMVGAADHRKLLHQPFEPARLAEASDELSLDNAASHLTWALHLATEL
QNSLANKDEPKMPAAYTLGTLQGPLDAGELTRLILHGQLEIEREGVCLLSLSLSLSLSLS
LSLSLSLSLSLSLSLSLSLSLPLPLSLSLSLSLSLSLSLSLCVPRYACNDFIHIHMLLAF
VAVEAGNYMDAVSHGRQVLEADGASSAVKAHAHLYMAQALAQADRLEEALAHVDPERLGA
LHAESTKLAADEHDDDGGDTAAHATGSQEQAYTVQSEFPAQALLSLAAVHCRQQAYTTAL
TCVQKAMAQITTPATLNHAVGLLVHCHLALDKPDEALRVARHHLMGGEPVIYP
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgcttttgatcgacattctcattcaacagggccagccggaacaagcacgacaggctctg
gcccaacttgaagccgcactacgtcccaacgacggtgatgaatctgcgacgagcaaaggc
aacacctcctctggacccgagacaactgatgcgggcactgaccttgccacgggcactgtg
gaccaggacttggaggcactgcataacaaactctcccagctccgcgcacgcctgcacctc
ttgacccgcaacatgaaagcgtgtaaacgtgagatcaaggcaaccctgaacagtcagacc
aagaacatcacggccctggtcttgcgggcctcgtacgaatatctgcgaggcaattgccgc
aaagccatcaaattgctcaactcgtggcccgttaaagatctggaggcggcgcgtcttgat
gagcttggcatcacgtattacaacaacatgggttgtgtccacctcaagatgggcaagcct
tcgttggcacacctatattttgcacagagtcaggacgcgcaccggcaacggcaagcagca
aacccacctctccaaccacacgaagaccatcgcgctgaactcgtttttaacgaaggactt
gccctcttccagctgcatcaatatatggctgctcacgagcgctttaccatggtaacgccg
tggcgtgcctcatcccctcaccactgggtgcggttggctgaatgttgtatccatgcctgc
tgtgaggccacacgtgcaagggctgcgcccacgggtaacacaatggtgggtgctgctgat
caccgcaagctcctccaccagccttttgagccagcacgtctggctgaagcatcagacgag
ctgtcgctagacaatgccgccagccacctcacttgggcgctgcacctggccactgagctc
cagaatagtttggcaaacaaagatgagccgaaaatgccggcagcgtatactttaggcaca
ctacaagggcctttggatgcgggcgagctgacccgactcattctccatgggcagctagag
atagagcgagagggagtgtgtctcttatctctgtctctgtctctgtctctgtctctgtct
ctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtct
ctgcctctgcctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtct
ctgtgtgtgcctcggtatgcatgcaacgatttcatccacatccacatgctcttggccttt
gtggcagtggaggctggcaactacatggatgccgtgtcacatggtcggcaagtgctcgag
gcggatggtgcttcaagcgccgtaaaagcccatgcccatctctacatggctcaagctcta
gcgcaagcagatcggctagaggaggctcttgcacacgtggatccggaaaggcttggtgcg
ttgcacgcggaatccacgaaattggctgccgatgagcacgatgatgacggtggcgacacc
gctgctcatgcgacgggcagccaggagcaagcgtacactgtccaatcagagttcccggcc
caagctctccttagcctggcggccgttcactgccggcaacaggcctacacgacagcgctg
acgtgcgtacaaaaggccatggcccaaatcaccacaccagccactctgaaccacgccgtc
ggcttgctggtgcattgccatttggcccttgacaagcctgatgaggccctgcgtgtggcc
cgccaccatctgatgggtggtgaaccagtcatttacccctga

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