Monosiga brevicollis: MONBRDRAFT_33607
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Entry
MONBRDRAFT_33607 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mbr
Monosiga brevicollis
Pathway
mbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MONBRDRAFT_33607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbr03041
]
MONBRDRAFT_33607
03009 Ribosome biogenesis [BR:
mbr03009
]
MONBRDRAFT_33607
Enzymes [BR:
mbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MONBRDRAFT_33607
Spliceosome [BR:
mbr03041
]
Complex A
U2 snRNP components
U2 related factors
MONBRDRAFT_33607
Complex B
MONBRDRAFT_33607
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MONBRDRAFT_33607
Ribosome biogenesis [BR:
mbr03009
]
Eukaryotic type
90S particles
Helicases
MONBRDRAFT_33607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
5893447
NCBI-ProteinID:
XP_001748285
JGI:
33607
UniProt:
A9V6D6
LinkDB
All DBs
AA seq
286 aa
AA seq
DB search
MPANSNMVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDDGELTPLGSQMS
EFPLDPQLSKMLIASTEFNCSNEMLSIAAMLSVPNVFLRPNDQKQAADEAKNRFAHVDGD
HLTMLNVYHAYKGNNDDKDWCWDNFLQFRSLKQADDVRKQLGGIMDRVGLARVSTDFSSR
DYYINIRKAMTAGFFMQVAHLERTGHYLTIKDNQVVLLHPSTALDHKPEWVLYHEFVLTS
KNYIRTVTEVKAEWLLSIAPQYYDMGNFPECEAKKILSRMIGRQRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaaattccaacatggtgttgcagctcaaaaagctcggcattgatgatctcgtg
cactttgatttcatggacccgccagcgccagagactctgatgcgtgcccttgagcttctc
aactaccttggtgccctggatgacgacggtgaattgacgcccctcggctctcaaatgtcc
gagtttccccttgaccctcagttgtccaaaatgctgattgccagtaccgagttcaactgc
agcaatgaaatgctctctatcgctgcgatgctttccgtgcccaatgtctttttgcgtccc
aacgaccagaagcaggctgccgatgaagccaagaaccgtttcgcgcacgtggatggtgat
catcttaccatgctcaacgtttatcatgcctacaagggcaacaacgatgacaaggactgg
tgctgggacaactttctccagtttcgctccctgaagcaagccgatgacgtgcgcaaacag
ctcggcggcatcatggatcgcgtcggtcttgcacgcgtcagcaccgacttttctagccgc
gactactacattaacattcgcaaggccatgacggctggcttcttcatgcaagtggcccac
cttgagcgcactggtcactacctgaccatcaaggacaaccaggtcgttctgctgcatccc
tcaaccgccctcgaccacaagcccgagtgggttctctaccatgagtttgttctcacatcc
aagaactacatccgcaccgtcacggaggttaaggctgaatggctgctgagcattgctccg
cagtactacgacatgggaaatttccccgagtgcgaggccaagaagatcttgtcgcgcatg
atcggccgccagcggcggtaa
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integrated database retrieval system
