Monosiga brevicollis: MONBRDRAFT_34715 Help Entry MONBRDRAFT_34715  CDS       T01042                                  Name (RefSeq) hypothetical protein   KO K14327   regulator of nonsense transcripts 2 Organism mbr  Monosiga brevicollis Pathway mbr03013   Nucleocytoplasmic transport mbr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:mbr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     MONBRDRAFT_34715    03015 mRNA surveillance pathway     MONBRDRAFT_34715  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mbr03019]     MONBRDRAFT_34715 Messenger RNA biogenesis [BR:mbr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      MONBRDRAFT_34715    mRNA cycle factors     P-body specific factors      MONBRDRAFT_34715 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MIF4G Upf2 ANAPC15 Motif Other DBs NCBI-GeneID:  5896060 NCBI-ProteinID:  XP_001750801 JGI:  34715 UniProt:  A9VDI9 LinkDB All DBs AA seq 1351 aa AA seqDB search MDTTGEEDPESESMAGTAATQEEALQLKEAIESRQQQRRIDRDLNINAEEHRPNRDFFRQ LDSTVKKTTGFVKKLKTTMNEGSQAQLLADFDKLNLSRYLEEVTASLAVAGQIKNASLGV TVALAVQLHRRYEEFADGFRQALVAILATTPDKADKEALAHFRFTFRLFAEMVLIGVFNE DNEGKELCKRIANYLKKDKEFDLLALSVHLVEHLALDLAAQLPREQLGILHKFELEATLD TPFPDLAPNMKALLVRWYSKVAERLVREKKALDKRLRQDQNQVEIKGELSSERSEGTRAM QSAYTELLQYTKVLANVLDQDMPDLPVAPAEDELMSGVVVDTSNPFKNLNPEDAASSLWV DVEEQEFYEHLPDLQARLPEVLFASSKKQRRKLRKKAEEEAGAQDEGASEGEQEGESPGD GPEGEVEDDGEEEVDEEAELREDANLDEYDVDQKAPLTAGPPEGGTANDKIVAFLEQLPN SMTTDAVDRLAEEFCYLNDSGARRRLAEALFMVNRNRVDLLRYYARLVATLYPGIPEVGT ELIKSLNGEFRFLYFKHPADRIESKVKNMRYIGELIKFRVFPINDVMRIMRVCVCVCVCV CVCVCVCVCVCVCVCVCVCVCVCVCACVCVCVCVCVCVSVSVSVSVSVSVSMSVSLSLSL SLSLSLSLSLSLSLSLSLSLSVSMSLSLSRLCLCLCLCLCLCLCLCVCVSMLLNKFTGQN VEMLTNLLDTCGRFLYRSPETHVRTKALLATMMKKKVALHDERYLTMIANAYYYCNPPER ALIEVKVRPPLHDYLRKLLYKDLKPKADVVKSLLPKLRKLPWSDPVFFQYGLKCFVRAWL LKFDEIMALASLLSGLRDHVPQLSYAVVDAVLEEIRLGMEINTPDINQRRVATVKFLSEL FNFTLVDSGVILNTLYSLISFAAHDPFLDPPHNAFRIKLVCVLLDTCGSFFAKSQEKRRL DNFLLYFQRYVLRKPQPLPMGIKFTLQDTLEALRKCSGAPELHLVRPLTPSPLFATGQHS PKMVPISTLEEAEAAIAELEAENLRKLEKKGFDIKALQQSQRAALADANAGEDSDSDDED DDDDDDDEGVSWSLSSSRNASHCYSTSSIMQMSASDQFTAHALWFLLAWADEHRDTHIEV DAGSTDAVANSEAVDDDDDNHVVLKEAKPHEPEPEDEDFVKEFNRMMTDLGKKSNQPAKA LDVAIPAQLKGQAPREVHGDGGSQSKLVFTLLTKKRQQEILVPAATGMAESMIQRQREEA AERQRNKRLVMEFDQRAKAEEEEEELRGVVHPILREQAVVPRSNARDTSRNNRRQRKGYI GPGARAQQRATMDEDEDEGEERWTGQPVFPT NT seq 4056 nt NT seq  +upstreamnt  +downstreamnt atggatacaacaggcgaagaggaccccgagtccgaatccatggcgggtactgcagcaacc caagaagaagcccttcaactcaaagaggcgatcgagtcacgccagcagcagcgccgcatt gaccgtgacctgaacatcaacgccgaagagcaccggcccaatcgggactttttccgtcag cttgactcgaccgtcaaaaaaaccacaggcttcgtcaagaaactcaagaccaccatgaac gagggctctcaagctcagcttctggccgactttgacaagctcaacctttcgcgatatctt gaggaggtaacggcttcgctggcggtggctggccagatcaagaatgccagcctcggcgtg accgtggcgttggccgtgcagcttcaccgtcgctacgaagagtttgccgatgggtttcgc caggcactggtggcaatccttgctaccacgccggacaaggctgataaggaggcattggcc cactttcgtttcacgtttcggctttttgccgagatggtgctcattggcgttttcaatgaa gacaacgaaggcaaagagctctgcaagcgcatcgccaactatttgaagaaggacaaagag tttgatctgctcgcattatccgtgcacttggttgaacatttagctctggatctcgcagct cagctgccccgcgagcagttggggatattgcacaagtttgaactcgaggccacacttgac acgccctttccggaccttgctccaaatatgaaggcgctccttgtgcgatggtacagtaaa gttgcggagcgcctcgtacgcgagaaaaaagccttggacaagcgcctacgacaagatcaa aatcaggttgaaatcaagggcgagctttcctcagaacgctcggaggggactagggctatg caaagcgcctacaccgaactattgcagtataccaaagtgctggccaacgtccttgaccag gacatgcctgatttacctgtggcgccggctgaagatgagctgatgtcaggcgttgtcgtg gacacgtccaaccctttcaagaacctcaacccggaggatgcagcatcaagcctgtgggta gatgttgaggagcaagagttttacgagcatctccccgacctacaggctcgccttccagag gtgctctttgcctcgagcaagaagcaacgccgcaaactgcggaagaaggccgaagaggag gctggcgcacaagatgagggcgcgagcgagggcgagcaggaaggtgaatcgccgggagat ggtcccgaaggcgaggttgaggatgatggcgaggaagaggtcgatgaggaggccgagctc agggaggacgccaatttggatgagtatgacgtggaccagaaggcaccactcacagccggc ccgccagagggggggacagcaaacgataagattgtggcttttcttgagcagttgccgaat agcatgacgacagatgccgtggaccgtctggcggaagagttttgctacttgaacgatagc ggcgcccggcggcgccttgctgaggcgttattcatggttaatcgcaatcgcgtcgatcta ctacgctactacgctcgccttgtggctacactctatccaggcattcctgaggtgggcacc gagctgatcaaaagcctcaacggtgaatttcgttttctctactttaagcatccggccgat cgcatcgagagcaaggtcaaaaacatgcgatacattggcgagctgatcaaatttcgcgtg tttccgatcaacgatgtgatgcgcatcatgcgggtgtgtgtgtgtgtgtgtgtgtgtgtg tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtc tgtgtctgtgtctgtgcctgtgtctgtgtctgtgtctgtgtctgtgtctgtgtgtctgtg tctgtgtctgtgtctgtgtctgtgtctgtgtctatgtctgtgtctctgtctctgtctctg tctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctg tctgtgtctatgtctctgtctctgtctcgtctctgtctctgtctctgtctctgtctctgt ctctgtctctgtctctgtgtctgtgtgtctatgctgctcaacaaattcaccggacaaaat gtggaaatgctcaccaacttactggacacgtgtggccgatttctctatcgctctcccgag acgcatgtgcgcaccaaggcgctcttggccaccatgatgaagaaaaaggtggctttgcac gatgaacgctacctgacgatgatcgccaatgcgtactactattgcaacccaccagagcgt gccctcatcgaagttaaagttcgacctccacttcacgactatttgcgcaaattgttgtac aaggatctcaaaccaaaggccgatgtcgtcaaatcgttgctgcccaagcttcgcaaactt ccctggtcggatccagtctttttccagtacggcctcaagtgctttgtgcgcgcatggctg ctcaagtttgacgagatcatggcgttggcctcgttgctgtctggacttcgtgatcacgtg cctcagctgtcgtatgccgttgttgacgctgttttggaggaaattcgcttgggcatggag atcaatacgccagacatcaaccagcgtcgggtagccaccgtcaagtttctgagcgagctc ttcaatttcacgcttgtggacagtggtgtcatcctgaacacactgtattctctcatttcc tttgccgcccacgacccattcctcgatccaccccacaacgcatttcgcatcaagcttgtc tgcgttcttcttgatacatgtgggagcttctttgcgaagagccaggagaagcgtcggttg gacaactttctactctacttccagcgatacgtcctgcgcaagccccagccgttgccaatg ggcattaagtttaccttgcaagacacgttggaagccctacgaaagtgcagtggtgctccc gagctgcatctcgtccgtccccttacgccaagcccattgtttgctactggtcaacacagt ccgaaaatggtccccatcagcacgctcgaagaggctgaggctgcaattgcagagttggag gccgagaaccttcgcaagcttgaaaagaagggctttgacatcaaagctctacagcagagc cagagggctgctctggccgatgccaatgccggtgaagacagcgactccgatgacgaagat gacgatgatgacgacgatgatgagggtgtgtcatggtctctctcttcttctcgcaatgca agccactgctattcgacctcttctatcatgcaaatgtcggccagcgatcaattcacggcg catgccttatggttcttgcttgcatgggcggatgaacaccgcgatacacacatagaagtt gacgcgggttcgacagacgccgtggcgaacagtgaagcggtcgatgacgatgacgacaat catgtggtgctcaaggaagcaaagccacacgagcccgagccagaggatgaagatttcgtc aaggagttcaatcgcatgatgacggacttgggcaagaagagcaatcagccagccaaggct ttggacgtggccattccagcacagctcaagggacaagcgcctcgcgaggttcacggagat ggtggtagtcagtccaagcttgtgtttacgttgctgaccaaaaagcgccagcaggaaatc ttggtgcctgcggcaacgggcatggccgaaagcatgatccaacgtcaacgtgaggaagca gccgagcgtcaacgaaacaagcgcctggtcatggagtttgatcagcgtgccaaggcagag gaagaggaggaagaacttcgtggtgttgtccaccctatcctccgcgagcaagcagttgtg ccccgaagcaatgcacgcgacacgtcgcgcaacaatcgacgccaacgcaagggatatatt ggtcctggtgcccgtgcacagcagcgtgcaaccatggatgaggacgaggacgagggagag gagcgatggactggccaacctgtatttccaacgtga

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