Monosiga brevicollis: MONBRDRAFT_37807
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Entry
MONBRDRAFT_37807 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mbr
Monosiga brevicollis
Pathway
mbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MONBRDRAFT_37807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbr03041
]
MONBRDRAFT_37807
Spliceosome [BR:
mbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MONBRDRAFT_37807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
SNF5
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR41
NBCH_WD40
Ge1_WD40
RMC1_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
INI1_DNA-bd
Beta-prop_WDR35_TULP_N
Nbas_N
Tricorn_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
5892522
NCBI-ProteinID:
XP_001747455
JGI:
37807
UniProt:
A9V3J2
LinkDB
All DBs
AA seq
894 aa
AA seq
DB search
MAEEGIELRRFSFVPGGQEYYCATDVARFMGRPLWQFYQLHPSLYRRQATAVERQLLQYW
DVAHAPLVTLLLAEEVDVLRAEDDGAPLLRQPRPVKSRKIMLGSTPVLLTQSAHAPMIPP
RAPGTERAVKGSSNPLRQYYRKPHGLASEADALEEQLVPIKLTLDKEGYKFRDQFTWNIN
EPHITPALFAELLCQDAELPSRFAGTFAHSIQQQLDAFRQTQMMDVSTRSALVRVEVCFL
VPRPDLIRSSFRVGDADVAPTASSHCPVMPVTHTNAIWLKVQYASSLLSDSFEWQHGAGS
PEDFAQSLIIELGLPSDYGPLLAHAIHEQLLADKKVRPRTPFSTPSMSLLVPGPTQSDKA
FERIQRQLATEQERRQAASDPQNEVATSTKAKPDERMDLTNEEQAELAEKNEAVAALERK
RKVCSLETFAPLPPLPRLLNFITFYSIFTIGQPSFPINSPLIAIITNAAPQARALNVPAA
DMDVKKMLRSFGEPICLFGENPGDRRERLRDLILERGPATETEKQAETEATPQGNKDIWY
HEGPAELEVARRFLADYSLPRASERLKAARLRLAKTDREEVATKQRTLARLQEFIAQASE
VGDTRPLSHCRFSPDGKSLAISSWSGLVKLWSVPDCKLQKTLKGHEERVSAVEWHPRSGL
DQQPGAINLASCDMNGAVHLWSMEKDTPLQTLDGHDMRVARARFHPSGRFLGTTCFDESW
RLFDLEQNVEVLHQEGHSMPVYDIAFHPDGSLAGTTSLDCYGRIWDLRTGKNILVLTGHR
QQVLSIDFSPNGFHVATASDDHTVRIWDLRKSTCVYTMPAHTNLISQLRYHPSGNFFVTS
SYDKTAKVWQAPECTPVRTLKGHESRIMSIDVSPDASLIATSSYDRSFKLWGAE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaaggcatcgagctgcgtcgattcagctttgtgccgggcggccaggagtac
tattgtgctactgatgtggcccgtttcatgggtcgcccgctgtggcaattctatcaactc
catccctctttgtatcgtcgccaagccactgcagtggagcgccagctgctgcaatactgg
gacgtggcccatgccccccttgtgaccctcctattggctgaggaggtggatgtcttgcga
gccgaggatgatggtgccccattgcttcggcaacctcgccccgtcaagtcacgcaaaatc
atgcttggctccacccctgtcctcctcacccaatcggcacatgcccccatgatcccgccc
cgcgcgccgggaaccgagcgcgcagtcaaagggtcatcaaaccccttgcgccaatattac
cgcaagccacacggactggcttcagaggcggatgcgctggaggaacaactggtaccaatc
aagctgacactagacaaggaaggctacaagtttcgggaccagtttacctggaacatcaac
gagccccatatcacgcctgccttgtttgccgagctactctgccaggatgccgagctgccc
tcgcgctttgccggcacgtttgcccactcaatacaacagcaactagatgcctttaggcag
actcaaatgatggacgtctccacccgctccgccctcgtgcgcgtagaggtgtgctttctt
gttcctcgtccagatttgatccgttcctcgtttcgtgtgggggatgctgatgttgcaccc
acagcgtcatctcattgcccggtcatgcctgtgacccataccaacgcaatctggctcaag
gtccaatatgcctctagtctgctgagcgacagctttgagtggcagcacggggccgggtct
ccagaagactttgctcagtccttgatcattgaactgggcctccccagcgattatggcccc
ctgcttgcacatgccatccacgagcaattgctggcagacaaaaaggtccgcccccgcacc
cctttctcgacaccaagcatgtctctgctggtgcctggtcccactcaatccgacaaggcc
tttgagcgcattcagcgccagctggcaactgaacaggaacgccgccaagctgcctcggac
cctcagaatgaagtggccacatccaccaaagccaaaccagatgaacggatggatctgacc
aatgaagagcaagccgagctcgcagaaaagaatgaggccgtagcggccttggagcgaaag
cgcaaggtctgttcactggaaaccttcgccccgttgcctccccttccccgcctcctgaat
tttatcaccttttactcgatctttaccatcggtcaaccctcctttcccatcaactcacca
ctgatcgcaatcatcacaaatgctgcaccccaggcacgcgccctcaatgtgcccgcagct
gacatggacgtgaagaagatgttgcgtagctttggcgaacctatttgtctcttcggtgaa
aacccgggcgaccggcgcgagcgtttacgcgacctcattctcgagcgtggccccgcaacc
gaaacagagaagcaagctgaaacggaagcgacacctcagggcaacaaggacatttggtat
cacgaaggccccgctgagttggaggtggcgcgtcgctttttggccgattattccctgccc
cgtgctagtgaacgcctgaaagctgcccgtcttcgtttggccaagacggatcgagaagag
gtagccaccaagcagcgtacgctcgctcgcttgcaagagtttattgcacaggccagtgag
gttggcgacacgcggcccctatcacattgccgatttagccctgatggcaagtcgttggcc
atttcttcctggagtggccttgtcaagctttggtcggtgccggactgcaagcttcaaaaa
acactcaaaggtcacgaagagcgcgtgagtgccgtcgagtggcaccctcgctcggggctg
gatcaacaaccgggtgccatcaacctggcctcctgtgacatgaatggtgccgtacacctc
tggtccatggagaaggacacgcctctgcaaacactggatggccatgatatgcgcgtggcg
cgcgcccgttttcaccccagtggtcgctttcttggcacaacctgctttgacgaatcatgg
cgccttttcgaccttgaacaaaacgttgaagtgctgcatcaagaggggcattccatgcca
gtatacgacattgccttccacccagatggctcgctggctggcacgaccagtttggactgc
tacggccgaatttgggatctgcgcacgggcaagaacatcttggtgctgacgggtcatcgc
cagcaggtcctgagcattgattttagccccaatggctttcatgttgccactgccagtgac
gatcacacggtgcgtatttgggatctgcgcaagtccacctgtgtatacacaatgcccgcc
cacaccaacctcatttcacagctgcgttatcacccaagcggcaatttctttgtaacttcc
tcgtacgataagacggccaaggtctggcaagctccagagtgcactcccgtgcgcacactc
aagggccatgagagccgcatcatgtccattgatgttagccccgatgcaagcttgattgcc
acatcgtcgtatgatcgctccttcaagctttggggcgcagagtaa
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