Monosiga brevicollis: MONBRDRAFT_39079
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Entry
MONBRDRAFT_39079 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mbr
Monosiga brevicollis
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbr03041
]
MONBRDRAFT_39079
03016 Transfer RNA biogenesis [BR:
mbr03016
]
MONBRDRAFT_39079
Enzymes [BR:
mbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MONBRDRAFT_39079
Spliceosome [BR:
mbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MONBRDRAFT_39079
Transfer RNA biogenesis [BR:
mbr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MONBRDRAFT_39079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
5895550
NCBI-ProteinID:
XP_001750248
JGI:
39079
UniProt:
A9VC27
LinkDB
All DBs
AA seq
413 aa
AA seq
DB search
MSAKDQLKQLAQGVEIIVGTPGRVEDFVKTGKLDLGRVRFFVMDEVDALLSQGHFNLLRD
LYKRMPQEDPAGRRLQVVVCSATLHSPDVTKLAETIMYHPAWVDLKGMDSVPDTVHHAVV
RIDPTRDTSRPSDARWWHQVPAYARTDDVHARDNIKPQRQSKEDLSEGVKRLKYKYLLAA
IDQHQMDQAIIFCRTKLDCDNVERFLQTEGGGAKAMVNGYTCVCVHSDRRVPERRENLQK
FKDGEARFLICTDVAARGIDVKGIPYVINFTMPDEKQNYVHRIGRVGRADRMGLAISFVA
TVPEKVWYHKCPARGKGCHNTRLVEQGGCTIWYDEPNLLSEVQAHIGVVIPELDESMAVP
HHEYDGKVVYGEARDKNKQQYAGHAALLAPSVAELTSLEHSAQTSYLQLLTSL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaaggaccagctcaagcaactggcgcaaggcgtggagattattgttggcacg
cccggccgtgtggaggactttgtcaaaacgggcaagctagatcttggccgcgtccgcttc
tttgtcatggacgaagtggatgccttgctctcgcagggccacttcaacctgctgcgcgac
ttgtacaagcgcatgcctcaagaagaccccgctgggcgccgcctgcaggtggttgtgtgc
tcggccaccctccactcacccgatgtcaccaagttggcagagaccatcatgtaccatcca
gcttgggttgacttgaagggcatggattcggtgccagacacggtgcaccatgccgttgtg
cgcatcgatcccacacgcgacacctcaaggccgtctgatgctaggtggtggcatcaagtc
cccgcgtacgcacgcacagacgatgtgcatgcccgcgacaacatcaagccacagcgtcaa
agcaaagaggatctgtctgaaggagtcaagcgtctcaagtacaaatatctcctggcagcc
atcgaccagcaccaaatggatcaagccatcattttctgccgcaccaagctcgactgcgat
aacgtggagcgcttcctgcagacagagggtggtggggccaaggccatggtgaatggttac
acctgcgtctgcgtgcactcggaccgccgcgtgcccgagcgtcgagagaatttgcaaaag
ttcaaggatggtgaggcacgcttcctgatctgcacggacgttgcagcacgtggcattgat
gtcaagggcatcccttatgtcatcaactttaccatgccggatgagaagcaaaactatgtg
caccgtatcggccgcgttggtcgcgccgaccgcatgggtctagccatctcattcgtggcc
actgtccccgaaaaggtgtggtatcacaaatgccctgcgcgcggcaagggctgtcacaac
acgcgcctggttgagcaaggtggctgtaccatctggtacgatgagcccaacctcttgagc
gaggtgcaggcccacattggtgtggtcattcccgagctcgatgagtcgatggcagtgcct
caccacgaatacgacggcaaagtggtctacggcgaggctcgggacaagaacaagcagcaa
tatgcgggtcatgcggccttactggcgccctcggtcgcagagttgacttcgttggagcac
tcggcgcaaacgtcgtaccttcagcttttgaccagcctctga
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