KEGG   Monosiga brevicollis: MONBRDRAFT_4811
Entry
MONBRDRAFT_4811   CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
mbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MONBRDRAFT_4811
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_4811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_4811
   03041 Spliceosome [BR:mbr03041]
    MONBRDRAFT_4811
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MONBRDRAFT_4811
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MONBRDRAFT_4811
Spliceosome [BR:mbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MONBRDRAFT_4811
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 5888087
NCBI-ProteinID: XP_001742552
JGI: 4811
UniProt: A9UP04
LinkDB
AA seq 115 aa
MLPLSLLRAASNHMMLVELKNGETYNGHLSKCDNYMNITMRDVTLTSKDGDRFWKMPECY
IRGNNIKFLRIPDEVIDQVVEEERSNKNRVGGRGRGRGRGRGRGGRGRGRGGSSD
NT seq 348 nt   +upstreamnt  +downstreamnt
atgctgccgctcagcctcctccgcgctgccagcaaccacatgatgctggtagagttgaag
aacggcgagacatacaacgggcacctttcaaagtgcgacaactacatgaacattacaatg
cgtgatgtcaccctcacgtccaaggacggtgatcgcttttggaagatgcccgagtgctac
atccgtggcaacaacatcaagtttctacgcatccctgatgaggtcattgatcaggtggtc
gaggaggagcgcagcaacaagaaccgggtgggcggtcgcggtcgcggtcgtggtcgtggc
cgtggtcgtggcggtcgtggccgtggtcgtggcggcagcagtgattga

DBGET integrated database retrieval system