Monosiga brevicollis: MONBRDRAFT_650 Help Entry MONBRDRAFT_650    CDS       T01042                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism mbr  Monosiga brevicollis Pathway mbr03013   Nucleocytoplasmic transport mbr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:mbr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     MONBRDRAFT_650    03015 mRNA surveillance pathway     MONBRDRAFT_650  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mbr03019]     MONBRDRAFT_650 Enzymes [BR:mbr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      MONBRDRAFT_650     5.6.2.5  RNA 5'-3' helicase      MONBRDRAFT_650 Messenger RNA biogenesis [BR:mbr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      MONBRDRAFT_650    mRNA cycle factors     Common to processing body (P body) and stress granule      MONBRDRAFT_650 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase NPHP3_N SLFN-g3_helicase NAT10_TcmA_helicase nSTAND3 SRP54 AAA_16 PhoH AAA_22 ATPase AAA_25 nSTAND_NTPase5 Ribosomal_S13_N AAA_5 Motif Other DBs NCBI-GeneID:  5887928 NCBI-ProteinID:  XP_001742619 JGI:  650 UniProt:  A9UPD7 LinkDB All DBs AA seq 856 aa AA seqDB search DDDDDEALVLSNLPAHACSYCGIHDPASVVKCLDTNRWFCNSRGNTSGSHIVNHLVRARS HAVMLHKDGPLGETVLECYNCGSRNVFSLGFIPAKADSVVVLLCRQPCASSSAAKDSNWD VAQWQPIISDRCFLPWLVKVPSHNDQMRARQITAEQIQKLEDLWRDNPDATLDDLEKPGV DEEVQEVLLQYEDAYHYQNIFGPLVKLEAEYDRRMKESQTCDGIAVRWDMGLNKKHTAFF TLPSLRVSHFRQDLKVMVGDELRLKYAGELSRPWQGEGRVTKIADNHSEEYALELRNKDV PTQCTQNFMVEFIWKSITFDRMQNAMKTFAVDERSVSAHIYHQLLGHQIEPALIKVTMPK RFSVKGLPELNHSQIEAIRAVLQRPLSLIQGPPGTGKTVTSASLVYHLVQQKHGKVLVCA PSNIAVDQLTEKIHRTGVKVLRVCAKSREEADTRVSFLSLHNQVRTMKGHPEYQKLLKLK DAVGELSEADEKRFRTLQRIIEQELLRSADVICCTCAAAGDRRVSGQTFRTVLIDEATQS TEPECMLPLVLGTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVLLGIRPVRLQVQ YRMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFYASMGQEEISASG TSYLNRTEAANVEKMVTRFLKSGVTPEQIGIVTPYEGQRAYIVQYMSFNGTLRQPLYEAV EVASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSK QALWNNLLVHYKENGCLVEGPLSNLKPCMMQFSRPRPLNYTVRNVGPLALATPRVSVKPR QTPASPLTYHSWPRPS NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt gacgacgacgatgacgaagcccttgtcttgagcaacttgcctgcccatgcctgcagctac tgcggcatccatgaccctgctagcgtcgtcaagtgcttggacaccaaccgctggttctgt aattcgcgtggcaatacgtctggcagccacattgtcaaccacctggttcgggcgcgaagc cacgctgtcatgctccacaaggatggcccgctgggcgagaccgttttggagtgctacaac tgcgggtctcgtaatgtcttttcgcttggcttcatccctgccaaggcggattcggtcgtc gtgctgctatgccgccaaccatgcgcctcctcatcagccgccaaggatagcaactgggac gtcgctcaatggcaacccattatcagcgaccgctgcttcctgccctggttggtcaaggtt ccatcccacaatgaccagatgcgtgctcgtcaaatcacagctgaacagatccagaagctc gaagatttgtggcgtgacaatcccgacgccacgctggacgatttggagaagccaggcgtt gatgaggaggtccaagaggtcctactgcagtacgaagatgcctaccactaccaaaacatt tttggcccccttgtcaagcttgaagctgaatatgatcgacgcatgaaagagagccagacc tgcgatggcattgctgtacgctgggatatgggcttgaataaaaagcatacggcctttttc acgctgccaagcctgagggtttctcattttagacaagatctgaaggtgatggttggtgac gagctgcgtttgaaatacgcaggcgagctcagtcgcccgtggcaaggcgagggccgcgtc accaagattgccgacaatcatagcgaagagtatgcgttggaacttcgcaacaaggatgtg cccacacagtgcacccagaactttatggtcgagttcatttggaagtccatcacctttgat cgcatgcaaaatgccatgaaaacctttgctgtcgatgagcgatccgtctccgcccacatc taccaccagttgcttggtcaccagattgagccggctttgatcaaagtcaccatgcccaag cgtttctccgtcaaaggccttcccgaactcaatcactcgcagattgaggccattcgcgcc gtgcttcagcgccccctaagcctcatccagggcccaccaggtaccggtaaaacagtgacg tccgcctctttggtttaccacttggtgcagcaaaagcacggcaaggttttggtctgcgcc ccaagcaacatcgccgtcgatcagctcaccgaaaagattcaccgcactggcgtcaaagtg ctgcgtgtgtgtgccaaatcacgagaggaggccgatacacgcgtgtcgttcctgtcactc cacaaccaggtgcggacaatgaagggacaccccgagtatcaaaagctgctcaaactcaag gacgccgttggagagctctcggaggcagatgaaaagcgcttccgaactctgcagcgcatc atcgaacaagagctgcttcgctccgctgacgtcatctgctgcacgtgtgctgcagccggc gaccggcgtgtctctggccagacctttcgtactgtcctcattgacgaagccactcaatcc actgagcctgagtgcatgttgcctttggttctcggcacgcggcagtgcgtgatggttggt gatcactgccagcttggccccgtggtcatgtgcaagaaagctgcatcggcgggtctttcc caatcgctgtttgagcgctgcgttctcctgggcattcgccccgtccgtctgcaagtgcag taccgtatgcacccatgcctcagcgagtttccttccaatacattctatgaaggcagcctg cagaatggcgtcactgcaagcgagcggctgatgccggctgtcgattttccctggcctgtg cccgagacgcccatgatgttctacgctagcatgggtcaagaggagatctcagcttcgggc acctcctatctcaaccgcaccgaggctgccaatgtcgagaagatggtcacgcgtttcctc aagtctggcgttacccctgaacaaatcggcattgtcaccccatatgagggccaacgcgct tacattgtccagtacatgagcttcaatggcacgctgcgtcagcccctctacgaggctgtg gaggttgcatcggttgacgctttccaaggccgagaaaaggactacatcattctgtcttgc acgcgttccaatgagcaccaaggcattggctttttgaatgacccccggcgtctgaatgtt gcccttacgcgtgccaagtacggtatcatcattgtgggcaaccccaaggtgctctccaag caagccctttggaacaacttgctggtccactacaaggaaaacggctgcttggtcgaaggc ccgctctccaacctcaagccgtgcatgatgcagttctcccgaccccgcccgctcaactac acggtacgaaatgtagggccgttggccttggctacacctcgagtctcagttaaacctcgc caaacccctgcttcaccattaacttatcattcatggccgcggccatcc

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