Methylobacterium brachiatum: EBB05_21085
Help
Entry
EBB05_21085 CDS
T11714
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mbrc Methylobacterium brachiatum
Pathway
mbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBB05_21085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrc03021
]
EBB05_21085
03019 Messenger RNA biogenesis [BR:
mbrc03019
]
EBB05_21085
Transcription machinery [BR:
mbrc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EBB05_21085
Messenger RNA biogenesis [BR:
mbrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EBB05_21085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
AAA_25
AAA
S1CSD-TOTE-2
TssC_VipB_C
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AYO84502
UniProt:
A0AAJ1WWW1
LinkDB
All DBs
Position
complement(4435282..4436652)
Genome browser
AA seq
456 aa
AA seq
DB search
MTPHPDAFADPLADPETADQADAPATPGTVAVLEGVREVKLFDLKAKTPTDLIAFAEEVE
VENASTMRKQELMFAILKQLAAKEVEIIGAGTVEVLQDGFGFLRSNDSNYLPGPDDIYIS
PTQIRRFGLRTGDTVEGPIRGPKDGERYFALLKVNTINFENPEKIKHKVHFDNLTPLFPT
KRFKLELENPTKKDFSPRIIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAQSITLNHPEC
YLIVLLIDERPEEVTDMIRSVKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVI
LLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALID
TGSRMDEVIFEEFKGTGNSEIILDRKVSDKRIFPAIDITRSGTRKEELLVPPDALKKTYV
LRRILNPMGVTDAIEFLLDKLRQTKSNSDFFDSMNT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacatcccgacgccttcgccgatcccctggccgatcccgagaccgcggatcag
gccgacgcgcccgccaccccgggcaccgtcgccgtcctcgagggcgtgcgcgaggtcaag
ctgttcgacctcaaggccaagacgcccaccgacctgatcgccttcgccgaggaggtcgag
gtcgagaacgcctcgaccatgcgcaagcaggagctgatgttcgccatcctgaagcagctc
gctgccaaggaggtcgagatcatcggcgccggcaccgtcgaggtgctgcaggacggcttc
ggcttcctgcgctcgaacgactcgaactacctgcccggcccggacgacatctacatctcg
ccgacccagatccggcgcttcggcctgcgcaccggcgacaccgtcgagggcccgatccgc
ggccccaaggacggcgagcgctacttcgcgctcttgaaggtcaacacgatcaacttcgag
aacccggagaagatcaagcacaaggtccatttcgacaacctgacgccgctcttccccacc
aagcggttcaagctcgagctcgagaatccgaccaagaaggatttctcgccccggatcatc
gacatcgtggcgccgatcggcaaaggccagcgcgccctgatcgtggcgccgccgcgcacc
ggcaagaccgtgctgatgcagaacatcgcgcagtcgatcaccctcaaccacccggaatgc
tacctcatcgtgctgctcatcgacgagcgccctgaggaggtcaccgacatgatccgctcg
gtgaagggcgaggtcatcgcctccaccttcgacgagccggccacccgccacgtgcaggtc
gccgagatggtgatcgagaaggccaagcgcctggtggagcacggccgcgacgtcgtcatc
ctgctcgactcgatcacccggctcggccgcgcctacaacaccgtggtgccgtcctccggc
aaggtgctgaccggcggtgtcgacgccaacgccctgcagcggcccaagcgcttcttcggc
gccgcccgcaacatcgaggagggcggctcgctctcgatcatcgccaccgcgctcatcgac
accggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaactcggag
atcatcctggaccgcaaggtctcggacaagcgcatcttcccggcgatcgacatcacccgc
tctggcacccgcaaggaggagctgctggtcccgccggacgcgctcaagaagacctatgtg
ctgcgccgcatcctcaacccgatgggcgtcaccgacgcgatcgagttcctgctcgacaag
ctgcgccagaccaagagcaacagcgacttcttcgactcgatgaacacctga
DBGET
integrated database retrieval system
