Mycobacterium branderi: MBRA_06730
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Entry
MBRA_06730 CDS
T07397
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MBRA_06730 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrd03021
]
MBRA_06730 (rpoB)
03400 DNA repair and recombination proteins [BR:
mbrd03400
]
MBRA_06730 (rpoB)
Enzymes [BR:
mbrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MBRA_06730 (rpoB)
Transcription machinery [BR:
mbrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MBRA_06730 (rpoB)
DNA repair and recombination proteins [BR:
mbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MBRA_06730 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BBZ10478
UniProt:
A0ABN6B139
LinkDB
All DBs
Position
complement(605304..608666)
Genome browser
AA seq
1120 aa
AA seq
DB search
MQTDSFEWLIGTPEWREKAAARGDVAPKGGLEEVLDELSPIEDFSGSMSLSFSDPRFDEV
KAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVV
VSQLVRSPGVYFDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVT
VLLKALGWTNEQITERFGFSEIMMSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTL
LENLFFKEKRYDLARVGRYKVNKKLGLNTESPITTTTLTEEDVVATIEYLVRLHEGHATM
TVPGGVEVPVETDDIDHFGNRRIRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQ
TLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGLEVRDV
HPSHYGRMCPIETPEGPNIGLIGSLAVYARVNPFGFIETPYRKVVDGRVTDEVVYLTADE
EDRHVVAQANSPIDDEGRFTEDRVLVRRKGGEVEYVSSSEVEFMDVSPRQMVSVATAMIP
FLEHDDANRALMGANMQRQAVPLVRSERPLVGTGMELRAAIDAGDVVVADKSGVVEEVSA
DYITVMADDGTRQSYRLRKFARSNHGTCANQRPIVDAGQRVEAGQVIADGPCTDNGEMAL
GKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPN
VSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDT
SLKVPHGESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVI
GKILPVEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDGKPDWASK
LPEELLEAEPNKIVSTPVFDGAREEELQGLLSSTLPNRDGDVLVDGDGKAILYDGRSGEP
FPYPVTTGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQA
YGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVL
SSDGAAIEMRDGDDEDLERAAANLGINLSRNESASVEDLA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccgactcgttcgagtggctgatcggcacgccggagtggcgtgagaaagcggcc
gcccgcggcgacgtcgcgcccaagggcgggctcgaagaggtgctcgacgagctctcgccg
atcgaggacttctccggctcgatgtcgctgtccttctccgacccgcgcttcgacgaggtc
aaggcgcccgtcgacgagtgcaaagacaaggacatgacgtacgcggccccgctgttcgtc
accgcggagttcatcaacaacaacaccggcgagatcaagagccagacggtgttcatgggc
gacttcccgatgatgaccgagaagggcacgttcatcatcaacgggaccgagcgcgtcgtc
gtcagccagctggtccgctctcccggtgtgtacttcgacgagaccatcgacaagtcgacc
gaaaagacgctgcattctgtcaaggtgatccccagccgcggcgcgtggctggagttcgac
gtcgacaagcgcgacaccgtcggtgtgcgcatcgaccgcaagcgccgccagccggtcacc
gtgctgctcaaggcgctgggctggaccaacgagcagatcaccgagcggttcggcttctcc
gagatcatgatgtcgacgctggagaaggacaacaccgtcggcaccgacgaggcactgctg
gacatctaccgcaagctgcgcccgggcgagccgcccaccaaggagtccgcgcagaccctg
ctggagaacctgttcttcaaggagaagcgctacgacctggcccgggtgggccgctacaag
gtcaacaagaagctcggcctgaacaccgagagcccgatcaccaccacgacgctcaccgaa
gaggacgtcgtcgccaccatcgagtacctcgtgcgcctgcacgagggccacgccacgatg
accgtcccgggcggtgtcgaggtgccggtggaaaccgacgacatcgaccacttcggcaac
cggcgcatccgcacggtcggcgagctgatccagaaccagatccgggtcggcatgtcgagg
atggagcgggtggtccgcgagcggatgaccacccaggacgtcgaggcgatcacgccgcag
accctgatcaacatccgcccggtcgtggcggcgatcaaggagttcttcggcaccagccag
ctctcgcagttcatggaccagaacaacccgctgtccgggttgacccacaagcgtcgcctg
aacgcgctgggcccgggtggtctgtcgcgggagcgggccgggctggaggtccgcgacgtg
cacccgagccactacggccggatgtgcccgatcgagaccccggaaggtccgaacatcggt
ctgatcgggtcgctggcggtgtacgcccgggtcaacccgttcggcttcatcgagaccccg
taccgcaaggtggtcgacggccgggtgaccgacgaggtggtgtacctgaccgccgacgag
gaggaccgccacgtcgtcgcgcaggccaactcgccgatcgacgacgagggccggttcacc
gaggaccgcgtcctggtccgccggaagggcggcgaggtcgagtacgtgtcgtcgtccgag
gtcgagttcatggacgtctcgccgcgccagatggtgtcggtggccaccgcgatgatcccg
ttcctcgagcacgacgacgccaaccgggccctgatgggtgccaacatgcagcgccaggcg
gttccgctggtgcgcagcgagcgtccgctggtcggtaccggcatggagctgcgcgccgcg
atcgacgccggtgacgtcgtcgtcgccgacaagagcggcgtggtcgaggaggtgtcggcg
gactacatcaccgtgatggccgacgacggcacccggcagagctaccggttacgcaagttc
gcccggtccaaccacggcacctgcgccaaccagcgtccgatcgtggacgccggccagcgt
gtcgaggccggccaggtgatcgccgacggaccgtgcaccgacaacggcgagatggcgctg
ggcaagaacctgctcgtggcgatcatgccgtgggagggccacaactacgaggacgccatc
atcctgtccaaccgcctggtggaggaggacgtgctgacctcgattcacatcgaggagcac
gagatcgacgcccgtgacaccaagctgggcgccgaggagatcacccgggacatcccgaac
gtctccgacgaggtgctggccgacctcgacgagcgcggcatcgtgcgcatcggcgccgag
gtccgcgacggcgacatcctggtcggcaaggtcaccccgaagggtgagaccgagctgacc
ccggaggagcggctgctgcgggcgatcttcggcgagaaggcccgcgaggtccgcgacacc
tccctgaaggtgccgcacggcgagtccggcaaggtgatcggcattcgggtgttctcccgc
gaggacgacgacgagctgcccgccggtgtcaacgagctggtccgcgtctacgtggcccag
aagcgcaagatctccgacggcgacaagctggccggccggcacggcaacaagggtgtgatc
ggcaagattttgcccgtcgaggacatgccgttcctcccggatggcacgccggtggacatc
atcctgaacacccacggtgtgccgcgacggatgaatatcgggcagatcctggagacccac
ctggggtggtgtgcgcacagtggctggaaggtcgacgggaagcccgactgggcgtccaag
ctgccggaggagctgctggaggccgagccgaacaagatcgtctcgacgccggtgttcgac
ggtgcccgcgaagaggagctgcagggcctgctgtcctcgacgctgcccaaccgcgacggc
gatgtgctggtcgacggcgacggcaaggcgatcctgtacgacgggcgctcgggtgagccg
ttcccgtacccggtgaccaccggctacatgtacatcatgaagctgcaccacctggtggac
gacaagatccacgcccgctcgacggggccgtactcgatgatcacccagcagccgctgggc
ggtaaggcgcagttcggtggccagcggttcggcgagatggagtgctgggccatgcaggcc
tacggcgcggcgtacacgctgcaggagctgttgaccatcaagtccgacgacacggtcggc
cgggtcaaggtgtacgaggcgatcgtcaagggcgagaacattcccgagccgggcatcccc
gagtcgttcaaggtgctgctcaaggagctgcagtcgctgtgcctcaacgtcgaagtgctc
tccagcgacggtgcggccatcgagatgcgcgacggcgacgacgaggatctcgagcgcgct
gcggcgaatctgggaatcaacttgtcccgcaacgaatctgcgtccgttgaggacttggcc
taa
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integrated database retrieval system
