Mycobacterium branderi: MBRA_12660
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Entry
MBRA_12660 CDS
T07397
Symbol
fadD_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd00061
Fatty acid biosynthesis
mbrd00071
Fatty acid degradation
mbrd01100
Metabolic pathways
mbrd01212
Fatty acid metabolism
mbrd02024
Quorum sensing
mbrd04146
Peroxisome
Module
mbrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MBRA_12660 (fadD_1)
00071 Fatty acid degradation
MBRA_12660 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MBRA_12660 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MBRA_12660 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mbrd01004
]
MBRA_12660 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbrd04147
]
MBRA_12660 (fadD_1)
Enzymes [BR:
mbrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MBRA_12660 (fadD_1)
Lipid biosynthesis proteins [BR:
mbrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MBRA_12660 (fadD_1)
Exosome [BR:
mbrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
MBRA_12660 (fadD_1)
Exosomal proteins of breast cancer cells
MBRA_12660 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BBZ11071
LinkDB
All DBs
Position
complement(1207360..1208835)
Genome browser
AA seq
491 aa
AA seq
DB search
MSSLAFNLVETARRHPERIALRLDEVEIPYTGLDAASACLAGLLVAHGLRPGDRVGVMLP
NVPYFAVAYYGVLRAGGVVVPMNVLLKDRETTFYLSDSQAKAIIAWHEFAPAAQAGAAAA
GAECIVVSPGEFEELICAAAPVAEPVAREDDDTAVILYTSGTTGTPKGAELTHANLRRNV
ATVVEMVDLAADDVILGALPLFHAFGQTAGLNAAVAAGACLTLIPRFDPAKALKIIERDG
VTVFEGVPTMFAAMLHSDTRPDTSSLRLCISGGAAMPVEVMRGFEETFDCLVLEGYGLSE
TSPVASFNHPGAERKPGSIGTPVAGVEMKLVDVRDDGVGEIAIRGHNVMKGYWNRPDATA
AAIDADGWFHTGDLARVDDDGYYFIVDRSKDMIIRGGYNVYPREIEEVLYEHPDVREAAV
VGIPDEMLGEEVGAAVALKPGAEADAAAIRDYLKDRVAGYKYPRRIWFVDELPKGPTGKI
LKRDIAIPVEA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctggccttcaacctggtcgagaccgcccgccgccacccggagcgcattgcg
ctgcgtctcgacgaagtcgaaattccctacaccgggctggatgcggcgagcgcctgcctg
gccggcctgctggtagcgcacggattgcggccgggggatcgggtcggcgtcatgctgccc
aacgttccctatttcgcggtcgcctattacggcgtactgcgggcgggcggcgtggtggtg
ccgatgaatgttctgctgaaggaccgcgagaccacgttctacctgtcggattcgcaggcc
aaggcgatcatcgcgtggcacgagttcgcgcccgccgcgcaggccggggcggcggccgcc
ggcgccgagtgcatcgtggtgagcccgggggagttcgaggagctgatctgcgccgccgca
cccgtcgccgaacccgttgcgcgcgaggacgacgacaccgcggtgatcctctacacgtcg
ggtaccaccggcacgccgaagggcgccgagctgacccacgccaacctgcgccgcaacgtc
gcgaccgtggtcgagatggtggacctggcggccgacgacgtgatccttggtgccctgccg
ctgtttcacgcgttcggccaaaccgccgggctgaatgccgccgtcgccgccggcgcctgc
ctgacgttgatcccccggttcgatccggccaaggcgctgaagatcatcgagcgcgacggc
gtgaccgtattcgaaggtgtcccgacgatgttcgccgcgatgctgcacagcgatacgcgc
ccggacacgtcgtcgctgcggctgtgtatctctggcggtgcggcaatgccggtcgaggtg
atgcgcggcttcgaagagaccttcgactgcctggtgctcgagggctacggtcttagcgag
acctcgccggtggcgtcgttcaaccatcccggcgccgagcgcaaaccgggctcgatcggc
accccggtcgccggcgtcgagatgaagctggtcgacgtccgcgacgacggggtcggcgag
atcgccatccgcggccacaacgtgatgaagggctactggaaccggcccgacgcgacggcc
gcggcgatcgacgccgacggctggttccataccggggacctggcccgtgtcgacgacgac
ggttactacttcatcgtcgaccgctccaaggacatgatcatccgcgggggctacaacgtc
tatccgcgcgagatcgaggaagtcctctacgagcatcccgacgtgcgtgaggcggcggtc
gtcggtatccccgacgagatgctcggcgaagaagtcggcgctgcggtcgctttgaagccc
ggtgccgaggcggacgcggcggcgatccgcgactacctcaaggatcgggtggccggctac
aagtacccgcggcgtatctggttcgtcgacgagttgcccaaggggcccaccggcaaaatc
ctcaagcgcgacatcgctatcccggtggaagcgtga
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