Mycobacterium branderi: MBRA_30820
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Entry
MBRA_30820 CDS
T07397
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBRA_30820 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbrd03021
]
MBRA_30820 (rho)
03019 Messenger RNA biogenesis [BR:
mbrd03019
]
MBRA_30820 (rho)
Transcription machinery [BR:
mbrd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MBRA_30820 (rho)
Messenger RNA biogenesis [BR:
mbrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MBRA_30820 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BBZ12887
UniProt:
A0A7I7W7D3
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All DBs
Position
3014643..3016400
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AA seq
585 aa
AA seq
DB search
MTDTDLITAGDSTQNDKLSNSVTPDTPTASDASTPAVNTKDGSLSTMVLPELRALANRAG
VKGTSGMRKNELIAAIREIQGHANGAAAKEDDKAEPAAAQTDTVSDEAPRRERRSAPRDA
DSAAAEQGDKQTETRDQQDTKTDERESDKGADQQGGQQNRGGSNQQDDDGEGRQGRRGRR
FRERRRRGERSGDGGEAELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMV
RKNGLRRGDAVTGAVRVPREGEGGGQNPRQKFNPLVRLDTVNGGPVEDAKKRPEFGKLTP
LYPNQRLRLETTPERLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDTANAIAKNNPE
CHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVEQGKDVV
VLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMV
ETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVAPSGTRKDELLLSPDEFAIVH
KLRRVLSGLDSHQAIDLLISQLRKTKNNYEFLVQVSKTTPGMDND
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctggcgacagcacccagaacgacaagctgtcgaat
tccgtgaccccagacactcccaccgcttcggacgcatccacgccggcggtgaataccaaa
gacggttcgctgtccacgatggtgcttcccgaattgcgtgcgctggccaaccgggccggc
gtcaagggcacctcgggcatgcgcaagaacgaactgatcgcggcgatccgggaaatccaa
ggacacgccaacggcgcggcggccaaagaggacgacaaggccgaaccggcggctgcgcaa
accgatacggtctccgacgaggctccccgccgcgaacgacgcagcgctcctcgcgatgcc
gactccgccgctgccgagcagggcgacaagcagaccgagacacgcgaccagcaggacacc
aagaccgacgagcgcgagtcggacaaaggtgcggaccagcagggcgggcagcagaaccgc
ggcggctcgaaccagcaagacgacgacggcgaaggacgccagggccggcggggccgccgg
ttccgggagcgcaggcgccgcggcgagcggtccggtgacggcggtgaagccgaactgcgt
gaagacgacgtcgtccagcctgtggccggcattctcgacgtcctggacaactacgcgttc
gtgcgcacctccggctatctggccggcccgcacgacgtctacgtgtcgatgaacatggtg
cgcaagaacggcttgcgccgcggcgatgccgtgaccggcgcggtgcgggtgccccgagaa
ggggaaggcggcgggcaaaatccccggcagaagttcaacccgctggtgcgtttggacacc
gtcaacggcgggcctgtcgaagacgccaagaagcgtccggaattcggcaaactcaccccg
ctgtaccccaaccagcggctgcgcctggaaaccacccccgaacggctcaccacccgggtg
atcgacctgatcatgccgatcgggaagggccagcgtgcgctgatcgtgtcgccgccgaaa
gcgggtaagacgacgatcctgcaggacaccgccaacgcgatcgccaagaacaatccggaa
tgccacctcatggtcgtgctcgtcgacgagcggcccgaggaggtcaccgacatgcagcgc
tcggtcaagggcgaggtcatcgcctcgaccttcgaccggccaccgtccgaccacacctcg
gttgccgagctggccatcgagcgcgccaagcggctggtcgagcagggcaaggacgtcgtg
gtgttgctcgactcgatcacccggctgggccgcgcctacaacaacgcctcaccggcgtcg
ggccgcatcctgtccggtggtgtggactccaccgcgctgtacccgcccaagcgattcctc
ggcgctgcgcgcaacatcgaggaaggcgggtcgctgaccatcatcgccacggcgatggtg
gagaccggatccaccggtgacacagtgattttcgaagagttcaagggcaccggtaacgcc
gagctcaaactggaccgcaagatcgccgagcgacgggtgttccccgcggtcgacgtggcc
ccgtccggtacccgcaaggacgaattgctcttgtcgccagacgaattcgcgatcgtgcac
aaactgcgcagggtgctctcagggctggattcgcatcaagcgatcgatctgctgatctcg
cagctgcgcaagaccaagaacaactacgaattcctggtgcaggtgtccaagaccactccg
ggcatggacaacgactaa
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