Mycobacterium branderi: MBRA_31030
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Entry
MBRA_31030 CDS
T07397
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBRA_31030 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbrd03000
]
MBRA_31030 (alkA)
03400 DNA repair and recombination proteins [BR:
mbrd03400
]
MBRA_31030 (alkA)
Enzymes [BR:
mbrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MBRA_31030 (alkA)
Transcription factors [BR:
mbrd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MBRA_31030 (alkA)
DNA repair and recombination proteins [BR:
mbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MBRA_31030 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
HHH
Motif
Other DBs
NCBI-ProteinID:
BBZ12908
LinkDB
All DBs
Position
complement(3038979..3040466)
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AA seq
495 aa
AA seq
DB search
MHEDFDRCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDREGVGGLAARLGYTARQLERL
LQAELGAGPLALARAQRTQTARVLIETTDLPFSDVAFAAGFSSIRQFNETLRAVCDSTPT
ALRQRAAAHFGCNHTSPGSVTLRLPVRTPFAYEGVFGHLAAGAVPGCEEVRDGMYRRSLR
LPAGNGVVSLAPAPDHVRCQLVLDDFRDLTTAIARCRRLLDLDADPEAVIDVLTADPELA
AVVAKAPGQRIPRTVDESELAIRAVLAQQVSTKAASTHAGRLVAAYGQPVPDAGGSLSHT
FPSVEQLAEIDPAHLAVPKARRRTVTALVAGLADGRVVLDSGCDWEAARQQLLMLPGVGP
WTAEVIAMRALGDPDAFPASDLGLRLAAKQLGLPADQRALIERSLRWRPWRSYATQHLWT
TLDHPVNHWPSKEIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaagacttcgaccgctgctatcgggccgtgcagtccaaggacgcccggttcgac
ggctggttcgtcaccgccgtattaaccaccggcatctattgccggcccagctgtcccgtg
cggccaccgtttgcccggaacgtgcggttctacccgaccgcggcggccgcccagcgggcc
ggctttagggcgtgcaagcggtgccggccggacgcgtcgccgggttcgccggaatggaac
gtgcgcggtgacgtcgtcgcgcgggcaatgcgactcatcgccgacggcaccgtggaccgc
gaaggcgtcggcggcctggccgcccgcctcggctacaccgcgcgtcagctggagcggttg
ctgcaggccgagctcggcgcgggaccgctcgcgctggcccgcgctcagcgcacgcagacc
gcccgcgtgctgatcgagacgaccgacctgccattcagcgacgtcgcgttcgccgcggga
ttttccagcatccgccagttcaacgagacgctgcgggcagtgtgcgacagcactcccacc
gcgttacgccaacgggccgcggcccacttcgggtgcaaccacacctcaccggggtcggtg
acactgcgcctgccggtacggacaccgttcgcctacgaaggcgtcttcggtcacctggcc
gcgggcgcggtccccggctgcgaagaagtgcgcgacggcatgtaccgccgctcactgcga
ctcccggcgggcaacggcgtcgtcagcctcgcgccggcacccgatcacgtccgctgccag
ctggtgctcgacgacttccgcgacctgacgacggcgatcgcccggtgccgacggctgttg
gacctcgacgccgaccccgaggcggtgatcgacgtgttgacggctgaccctgagctcgcc
gcggtggtagccaaggcgccgggccaacgcattcctcgcaccgtcgacgaaagcgaactg
gccatccgcgccgtgctggctcaacaggtctcgacaaaagccgccagcacccacgcgggc
aggctggtcgccgcttacgggcaaccggtaccggatgccggtggcagcctgtcacacacc
ttcccgtcggtcgagcaactggccgagatcgacccggctcatctggcggtgcccaaggcg
cggcgacgcacagtgacggcgttggtcgcgggactcgccgacggccgcgtggtgctcgac
tcgggttgcgactgggaggcggcccgccagcagctgctgatgttgcccggcgtgggtcct
tggacggccgaagtgattgccatgcgtgcactgggcgacccggatgcttttccggccagc
gacctcggactgcgactggccgccaaacagctgggtctaccggcggatcagcgggcgctc
atcgagcgcagcctgcggtggcgcccatggcggtcctacgccacccagcatctctggacg
acgctggaccatccggtgaaccattggccctcaaaggagatcgcatga
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