Mycobacterium branderi: MBRA_40220
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Entry
MBRA_40220 CDS
T07397
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbrd
Mycobacterium branderi
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbrd03032
]
MBRA_40220
03400 DNA repair and recombination proteins [BR:
mbrd03400
]
MBRA_40220
Enzymes [BR:
mbrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MBRA_40220
DNA replication proteins [BR:
mbrd03032
]
Prokaryotic type
DNA Topoisomerases
MBRA_40220
DNA repair and recombination proteins [BR:
mbrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MBRA_40220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBZ13827
LinkDB
All DBs
Position
4165926..4166936
Genome browser
AA seq
336 aa
AA seq
DB search
MRLRRSIVGGPGYRRVRRGRGFSYIDEQREPVDDPEVLARIEALVIPPAWKNVWICAHPN
GHIQAVGTDDAGRRQYLYHEQWRAERAEEKYDRALSLAKRLPDWRTRVLADLRGRGLQRD
RVLAVAQHLIDRGYFRAGGEEYAQENGSFGLATLLRDHVRLHHGCVEFDYPAKSGVRQTV
SLDDPLVIRAVRSLLRAETDIPRLLVYRTPDGWSEVHAEDLNARFRELVGDEFSVKDLRT
WHGTVLAAEAFANAREPTSKTARRREEAAVMRLVAEELGNTPAVARSSYVDPRVVTAYEQ
GITIAPALRRAERERTPVGRQHVLERATARVIKRVS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcgcagaagcatcgtgggcgggccgggctatcgccgggttcgccgcgggcgc
ggcttctcctacatcgacgaacagcgcgagccggtcgacgatcccgaggtgctggcccgg
atcgaggcgctggtgataccgcccgcctggaagaacgtgtggatctgcgcgcatcccaac
ggccacatccaggcggtcggcacggacgacgccggccggcgccagtacctctaccacgag
cagtggcgggctgagcgggccgaggagaaatacgaccgtgccctgagcctggcgaaacgt
ctgcccgactggcgcacgcgggtcctggccgatctgcggggccgtggtctacaacgcgac
cgagtcctcgcggtggcccagcacctgatcgaccgcggctactttcgggctggcggcgag
gagtacgcccaggagaacggcagcttcgggctggcgactctgctgcgcgaccacgtccgg
ctgcaccacggctgcgtggaattcgactacccggctaaaagcggtgtgcgacagacggtt
tcactggatgatccgctggtgatccgggcagtacggtcgttgctgcgcgccgaaaccgac
attccccggctgctggtctaccgcactcccgacggctggagcgaggtgcacgccgaggac
ctcaacgcgcggttccgtgagttggtcggcgacgaattcagcgtcaaagatctgcggacg
tggcacggcacggtgttggcggccgaggcgttcgcaaatgcgcgggagccgacgtcgaag
accgctcgccggcgcgaggaagctgccgtaatgcgtttggttgccgaggaattgggcaac
acgcctgcggttgcgcgcagttcgtacgtggacccgcgggtcgtgacggcctacgagcag
ggcatcacgatcgctccggccctgcgccgtgccgagcgcgaacgcacgccagtgggtcgt
cagcacgtgctcgagagggccactgcccgcgtgatcaaacgagtgtcctga
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