Mycobacterium branderi: MBRA_48090
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Entry
MBRA_48090 CDS
T07397
Symbol
mutM_2
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBRA_48090 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbrd03400
]
MBRA_48090 (mutM_2)
Enzymes [BR:
mbrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MBRA_48090 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MBRA_48090 (mutM_2)
DNA repair and recombination proteins [BR:
mbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MBRA_48090 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
TackOD1
DUF7573
HU-HIG
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BBZ14614
LinkDB
All DBs
Position
complement(4927839..4928651)
Genome browser
AA seq
270 aa
AA seq
DB search
MADHVVGKTISAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRGKYLWLTLDDGDTA
LVVHLGMSGQMLIGTVPNTGHLRIAAVLDDGTALSFVDQRTFGGWLLADLVTVDGSVVPA
PVAHLGRDPLDPRFDAKAVVNVLRRKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGT
RLADTLTRPKLTAVLQAAADVMRDALAHGGTSFDSLYVNVNGQSGYFDRSLDAYGRDGQP
CRRCGAVIRREKFMNRSSFYCPRCQPRPRR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaccatgtggtcggcaagaccatctccgcggtccgggtgcatcacccccgggcg
gtgcgccgccacgaggccggcccggccgatttgacggcgcggctgctcggtgcgcggatc
accggtaccgaccggcgcggcaaatatctgtggctgacgctggacgacggcgacaccgcg
ctcgtcgtgcatctgggaatgagcgggcagatgctgatcggcaccgtccccaacaccggt
cacctgcggattgccgcggtgctcgacgacgggaccgcgctgagctttgtcgaccagcgg
accttcggtgggtggttgttggccgacctggtgaccgtcgacggcagtgtggtgcccgcg
ccggtggcgcacttgggccgcgacccgctcgacccgcgcttcgacgccaaggcggtcgtt
aatgtgttgcggcgcaagcattccgagatcaaacgccaactgctggaccaaaccgtcgtg
tcggggatcggcaacatctacgccgacgaggcgctgtggcgggccaaggtgaacggcacg
cggctggccgacacgctgaccaggccgaaactgaccgccgtgctgcaggcggcggccgac
gtgatgcgcgatgcgctggcccacggcggcacctcattcgattcgctctatgtcaatgtc
aacggccagtccggctacttcgaccggtcgctggacgcctacggccgcgacggccaacca
tgccggcgctgcggcgcggtgatccgccgcgagaaattcatgaaccgctcgtcgttctac
tgtccgaggtgtcaaccgcggccacgccggtag
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