Microbulbifer bruguierae: PVT68_00815
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Entry
PVT68_00815 CDS
T09733
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mbrg
Microbulbifer bruguierae
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbrg03016
]
PVT68_00815
Enzymes [BR:
mbrg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PVT68_00815
Transfer RNA biogenesis [BR:
mbrg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PVT68_00815
Prokaryotic type
tRNA splicing ligases
PVT68_00815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WGL16854
UniProt:
A0ABY8NEN6
LinkDB
All DBs
Position
179346..180554
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AA seq
402 aa
AA seq
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MPVKMVLNNNAQPGSVPVKIFTSDIENSALQQLKNIAQLPIVYSHVAAMPDVHMGIGATV
GSVIPTLGAIIPAAVGVDIGCGMNAVRTSLHAHQLPDNLKPLQDAIEAQVPVGFARHKQV
HARENAAKNLASGADLLFARHPELLKKLRNPQETWVTQLGTLGGGNHFIEICLDEDNFVW
VMLHSGSRGIGNAIGQHFIQLAKRDMEGHIHNLPDRDLAYFQEGNPHFDEYVDAVHWAQE
YARVNRQEMMKLVLEVLQGQLPPFTLTSEAINCHHNYVVREQHFGRDVFVTRKGAISAQH
DQLGIIPGSMGTRSYIVRGRGNPEAFCSCAHGAGRRMSRTAARKRFTTRDLVAQTMGVQC
RKDKGVIDEIPAAYKDIDQVMENQTDLVDVVHTLKQVICVKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaaaatggtacttaataacaatgcacagccgggttctgtaccggtaaaaatc
ttcacctcggatattgaaaattcggcattgcaacagctgaagaatattgcccagcttccc
atcgtatattctcatgtggcggcgatgccggacgtacatatgggtattggcgcaacggta
ggctcggtgatcccgaccctgggagcaatcattccggcggcggtgggcgttgatattggc
tgtggcatgaatgccgtgcgcacgtccctgcatgctcatcagttaccggacaacctgaag
ccgctgcaggatgcgattgaggctcaggtgccggtgggcttcgcgcgccacaaacaggtt
cacgcccgagaaaatgcagcgaaaaatctcgcttctggtgccgacctgttgtttgcccgc
catccagaattgctcaagaagctgcgtaatccccaggagacctgggtaactcagttgggg
acactcggtggtgggaaccactttatcgaaatctgtctggatgaagacaattttgtctgg
gtaatgctgcactccggcagccgtggaatagggaatgccattggtcagcactttatccag
ctggcaaaacgggacatggagggacatattcataacctcccagaccgtgatctggcctat
ttccaggagggaaatccgcacttcgatgaatatgtcgacgcggtgcactgggcgcaggag
tatgcgcgggtcaatcgtcaggagatgatgaagctggtattggaggttctacagggacag
ttgccaccgttcacactgacttctgaagcgatcaactgccatcacaattacgtggtgcgc
gagcagcatttcgggcgcgatgtattcgttacccgtaagggggcgatcagtgctcagcat
gaccagttgggaattattcccgggtccatgggtacccgatcctatatcgtgcgtggccgc
gggaacccggaagctttctgttcctgtgctcacggtgcggggcgacgcatgagtcgcaca
gcagcgcgcaagcgattcaccacaagggatctggtagcgcagacaatgggggttcagtgt
cgcaaggacaaaggggtaattgatgagatcccggcggcctataaagatattgaccaggtg
atggagaaccaaacggatctggtggatgtggtgcataccctgaaacaggtgatctgcgtt
aaaggctga
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