Microbulbifer bruguierae: PVT68_02950
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Entry
PVT68_02950 CDS
T09733
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbrg
Microbulbifer bruguierae
Brite
KEGG Orthology (KO) [BR:
mbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbrg03032
]
PVT68_02950 (topA)
03400 DNA repair and recombination proteins [BR:
mbrg03400
]
PVT68_02950 (topA)
Enzymes [BR:
mbrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PVT68_02950 (topA)
DNA replication proteins [BR:
mbrg03032
]
Prokaryotic type
DNA Topoisomerases
PVT68_02950 (topA)
DNA repair and recombination proteins [BR:
mbrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PVT68_02950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
WGL17266
LinkDB
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Position
complement(685102..687810)
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AA seq
902 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSIGHIRDLPTGASSKQPVDAKERARRAAETR
KLSPEDKEVYKRQKGREQLIKRMGIDPDHNWEAHYEILPGKEKVVDELRKLAASADHVYL
ATDLDREGEAIAWHLRESIGGDEGRFRRVVFNEITKSAIQEAFKDPGPLDIDRVNAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADTQT
AKSDSLRLEVKKQSGENFRPTNEEQAMAAFKALQASSFQVAARDDKPTSSKPGAPYITST
LQQAASNRLSFSVKKTMMMAQRLYEAGYITYMRTDSTNLSAEAVASVREYIGENYGDKYL
PENPNRYSSKEGAQEAHEAIRPSDVRVKPNMLSGMERDAERLYTLIWQQFVACQMTPAQF
TSTSIVVNAGDFELRTRGRVIRFDGFLRVAPAQSKKDEDLVLPDIKVGETLELKKLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFQNLMDYGFTANLEESLDAVAEGKRGWKDLLDDFYSDFSNRLEVAQDKEGGMRRN
TPTDTDIECSQCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVSGEEAIDADKDEE
AETRQLRDKRRCTKCGTAMDSYLLDEQRKLHICGNNPDCSGFEVEKGTFKIKGYDGPLIE
CDKCGSDMQLKSGRFGKYFGCTNESCKNTRKLLKNGQPAPPKMDPVPMPELACEKVDDTY
ILRDGASGLFLAASQFPKNRETRAPLIKELLPHKDEIDPKYSFLFSAPTEDNEGRDTVVR
FSRKTQEQYVQTEEDGKATGWKAFYHDGKWQVEAPAKKKAPAKKAATKKAPAKKAPSKKA
KT
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcatcgtcgagtcaccggccaaggcaaaaaccattaacaaatat
ctcggaaaggactttgtggtgaagtccagtattggtcatatccgggatctccccaccggt
gcctccagtaaacagccggtggacgccaaggagcgcgcccggcgcgctgcggaaacccgc
aagctgtccccggaagataaagaggtctacaagcgccagaaaggtcgcgaacagctgatc
aagcgtatgggcattgatccggaccacaactgggaagcccactacgaaattcttcctggc
aaggaaaaggtggtcgatgaattgcgcaaacttgccgccagcgccgaccatgtctatctc
gcaacggacttggatcgcgagggggaggcaattgcctggcatttgcgtgagtccatcggt
ggcgatgaagggcggttccgtcgtgtggtgtttaacgaaatcaccaagagcgcgattcag
gaggcttttaaagatccgggccccctggatatcgaccgcgtcaatgcgcaacaggcgcga
cgctttctcgaccgtattgtcggatatatggtctcgcctctgctgtgggaaaaggtcgct
cgcggtctgtccgctggtcgtgtgcaatcggttgccgtgcgccttgtggtggagcgggag
cgtgaaattcgcgccttcataccagaagagtactggactctgtttgcggatacgcaaacc
gccaagtcggactcactgcgtctcgaagtaaagaagcagagcggtgaaaacttccgcccg
accaatgaagagcaggccatggcggccttcaaggcgctgcaggcgagcagcttccaggtc
gcggcccgcgatgacaagcccaccagttccaagcctggcgcgccctatatcacgtcgacc
ctacagcaggccgcgagcaatcgtctcagctttagcgtcaagaaaaccatgatgatggcc
cagcgcttgtatgaggctggttacatcacttacatgcgtactgactccaccaatctgagt
gcggaagcggtcgcttcggtgcgggaatatatcggcgaaaattacggcgataagtatttg
ccggaaaatcccaaccgctatagcagcaaagagggcgcgcaagaggcgcacgaggctatc
cgtccctcggatgtgcgagtgaagccaaacatgctctctggcatggagcgggatgctgag
cgtctgtataccctgatctggcagcaatttgtcgcctgtcagatgacgccagcccagttt
acctccacctctatcgtggtgaacgccggggattttgagctgcgcacccgcggacgcgta
atccgttttgacggctttttgagagtcgcaccggcacagagtaaaaaagacgaagatctg
gtgctgccggatatcaaggtgggggaaactctcgagctcaagaagctcgatcccaagcag
cacttcaccaaaccgccggcccgcttcagtgaggcggcactggttaaagagttggaaaag
cgcggtattggtcgcccatctacctacgcatccattatttcgaccattcaggatcgcggt
tacgtacgcttggaaaatcgtcgtttctatgcggaaaaaatgggcgatatcgttactgac
cgtttgagcgaaagtttccagaacctgatggactacggctttactgccaacctggaggag
tccctggatgcggtcgcggaagggaaacggggctggaaggacctgctggacgacttctat
tccgactttagcaatcgcctggaagtcgctcaggataaagaaggcggcatgcgccgcaat
acgcctacggatactgatattgaatgcagtcagtgcggtcgccacatgcagattcgtacc
ggttccaccggtgtgtttctggggtgctccgggtatgcgctgccgccgaaagagcgctgc
accaacaccatgaacctggtgtcaggtgaagaagcgattgatgcagataaggacgaagag
gcggaaacccgacagctgcgcgataagcgccgttgtacgaagtgcggtaccgccatggac
agctacctgttggacgaacagcgcaagctgcatatttgtggcaacaacccggattgcagc
ggtttcgaagtggaaaagggcacgttcaaaatcaagggctatgacggtccgctgatcgag
tgcgataagtgcggtagcgatatgcagctgaagtctggccgcttcggtaagtacttcggt
tgtaccaatgagagttgtaagaacacccgcaaactgctgaaaaatggtcagcctgcgccg
ccgaaaatggatccggtaccaatgccggagttggcgtgtgaaaaggtggatgacacctat
attcttcgcgacggcgcttcgggcctgttcctcgcagcgagccagtttcccaaaaaccgc
gaaacccgcgcgccgttgatcaaggaactgttgcctcacaaggatgagattgatcccaaa
tacagcttcctgttctctgcgcccacagaggacaacgaaggcagggatacggtagtgcgt
tttagtcgcaagacccaggagcagtacgtacagaccgaagaggacggcaaggcgaccggg
tggaaggcgttctatcatgacggtaaatggcaggtagaagcgccggccaagaagaaagcc
ccggcgaagaaggcggccaccaagaaggcaccagctaaaaaggctccttccaaaaaggcc
aaaacttga
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